Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0578 ATGGGTTCACCAGAATTGTTGGCAGAGAAAAGTTCCAGCAAGCTTATTGGGATTCGGATCCTACAGTATTTAGAAGGAAGCCCCGTCTCCTTCAAAACCCACCAAGCCATCGTTTTGATTGTGACATTTTTTGCTTATGCTAGTTATCATGCCACACGAAAAACCACAAGTATTGTGAAGAGTGTGCTTGATCCACAATCACCAGACATAGGCCTGAGCTTTCCATTGAGGCTAACCAATTTCAATGAGTCAACTGGATCAAAGAGACCTTCTTCAAAACTTGGAGATGGTTGGGCTCCATTTAATGGATCAGATGGGACATCCCTTCTTGGTGAATTAGACGTTGCTTTTCTTTCAGTCTATGCTTTTGGTATGTACTTTTCTGGACATTTTGGTGATCGGTGCAATTTGAGGATTTTTCTGACAGTGGGGATGCTAGGAACTGGATTGTTCACTTCACTCTTTGGTGTAGGGTACTGGGGAAACATCCACAACTTCTACTATTATTTAGTAGTTCAAATGATTGCTGGATTGTTTCAATCCACTGGATGGCCATCTGTAGTTGCTGTTGTGGGGAACTGGTTTGGGAAGAGCAAGAGAGGGTTGATCATGGGAATTTGGAATGCTCACACTTCTATTGGGAACATAGCAGGTTCTCTGATTGCTTCTGCTATGTTGGGCTATGGATGGGGTTGGTCGTTTGTGGTGCCAGGTCTAATGATTGCTTTCGTTGGTTTGGTGGTTTTCCTTATATTGCCGGTCTCCCCTGAGTCTGTTGGAGCTGATAGAGAGGAGGATGAATACAGTTGTCCAAAGAAAGGTGGAGAAGTTTCAGAGCCACTGTTAAGGCAAGAATCTCCAATTGAGGAGAAAGCAGTTGGGTTCATAGAGGCATGGAAAATTCCTGGGGTTGCTCCTTTTGCTCTTTGTCTGTTTTTCGCCAAATTGGTTGCATATACGTTTCTCTATTGGCTCCCTTTCTATGTTAGCCACACAGCAATTGATGGGAAATATATATCTAGTGAGACAGCAGGATCTCTATCCACTTTATTTGATTTTGGAGGGGTGCTGGGTGGAATTCTTGCTGGCCACATTTCTGATCACTTAAATGCTAGAGCCATAACAGCAGCAAGTTTCATGTACTGTGCGATCCCTGCTCTCTTCTTTTATCGAAGTTACGGGCACATTTCCTTGATTTTAAATGGGGCATTGATGTTCATCACTGGCATGTTCGTGAACGGTCCTTATGCTCTCATAACCACTGCAGTTTCGGCTGACCTGGGAACACATAAGTCATTGAAGGGTAATTCACGAGCCCTGGCAACCGTCACGGCAATCATTGATGGAACCGGTTCTATAGGGGCTGCAGTTGGGCCTTTATTGACAGGTTACATATCTGCGAAGAGCTGGAGTGCTGTTTTCACAATGTTGATGGCAGCAGCTTTAGTCGCAGGGTTGCTTTTGACCAGGCTTGTAGTGTCAGAGGTGGCCGCAAAGATTGAGGAGTCGAGGTCTAATAGAGCACAAGAATGTCAACTCGAAGTATAA 1548 0.4438 MGSPELLAEKSSSKLIGIRILQYLEGSPVSFKTHQAIVLIVTFFAYASYHATRKTTSIVKSVLDPQSPDIGLSFPLRLTNFNESTGSKRPSSKLGDGWAPFNGSDGTSLLGELDVAFLSVYAFGMYFSGHFGDRCNLRIFLTVGMLGTGLFTSLFGVGYWGNIHNFYYYLVVQMIAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNIAGSLIASAMLGYGWGWSFVVPGLMIAFVGLVVFLILPVSPESVGADREEDEYSCPKKGGEVSEPLLRQESPIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAIDGKYISSETAGSLSTLFDFGGVLGGILAGHISDHLNARAITAASFMYCAIPALFFYRSYGHISLILNGALMFITGMFVNGPYALITTAVSADLGTHKSLKGNSRALATVTAIIDGTGSIGAAVGPLLTGYISAKSWSAVFTMLMAAALVAGLLLTRLVVSEVAAKIEESRSNRAQECQLEV* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0578 515 SUPERFAMILY MFS general substrate transporter 107 492 IPR036259 -
Apr5g0578 515 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 2 507 - -
Apr5g0578 515 Pfam Major Facilitator Superfamily 110 427 IPR011701 GO:0022857|GO:0055085
Apr5g0578 515 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 497 IPR020846 GO:0022857
Apr5g0578 515 Gene3D MFS general substrate transporter like domains 298 506 IPR036259 -
Apr5g0578 515 PIRSF Hexose_phosphate_transp 23 510 IPR000849 GO:0016021|GO:0022857|GO:0055085
Apr5g0578 515 Gene3D MFS general substrate transporter like domains 29 266 IPR036259 -
Apr5g0578 515 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 2 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0578 Apr-Chr5 7897628 7901214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0578 1 515 Organic Solute Cotransporters AT3G47420 73.180 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0578 K13783 - gmx:100799211 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0578 5 7897628 7901214 Apr5g0578 5 7897628 7901214 ECH