Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0570 ATGGCATTGGAGCAACAGGAGAAGAGGGAGAAGCAACTGCAGAGGGGAATCGCGGAGTTCTACGACGAGTCGTCTAGGATATGGGAGGACATTTGGGGTGATCATATGCACCATGGCTTTTACGACCCTAATTCGACCGTTTCTGCTTCGGATCACCGAGATGCTCAGATCCGAATGATCGAGGAGTCCCTTCGTTTTGCTGCTCTTTCTGAGGAGGGTGACACATGGCCCAAGAGTATAGTTGATGTTGGGTGTGGCATAGGGGGCAGCACGAGATACCTGGCCAAAAAGTATGGGGCAAAGAGCGTAGGCATCACTCTGAGTCCTGTTCAAGCTGAAAGAGCTAATGCTATTGCTGCTGCTCAAGGATTCTCTGACAAGGTTTCCTTTCTAGTGGCTGACGCTGTAGAGCAACCATTCCCCGATGGGCAATTTGATTTAGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTAACAAAGCAAAGTTTGTTGGAGAGTTAGCTCGGGTAGCAGCACCAGGTGGAACCATAATAATAGTAACATGGTGCCACAGGGATCTTGGCCCTGCTGAAGATTCCTTACATCCGTGGGAGAAAGATCTTTTGAAGAGGATATGCGATGCTTATTACCTTCCAGCATGGTCTTCAACTTCTGATTATGTCAGACTGCTCCAATCCCTGTCACTTCAGGATATTAAGACAGCAGATTGGTCTCCCTTTGTTGCTCCTTTTTGGCCAGCAGTGATACGCTCAGCATTGACATGGAAGGGTCTCACTTCACTCTTTCGCAGCGGACTAAAAACCGTAAAGGGAGCTTTGGCTATGCCATTGATGATAAAAGGATACAAGAAGGATCTAATTAAGTTTGCCATCATTACATGTCGAAAGCCTAAATAA 897 0.4738 MALEQQEKREKQLQRGIAEFYDESSRIWEDIWGDHMHHGFYDPNSTVSASDHRDAQIRMIEESLRFAALSEEGDTWPKSIVDVGCGIGGSTRYLAKKYGAKSVGITLSPVQAERANAIAAAQGFSDKVSFLVADAVEQPFPDGQFDLVWSMESGEHMPNKAKFVGELARVAAPGGTIIIVTWCHRDLGPAEDSLHPWEKDLLKRICDAYYLPAWSSTSDYVRLLQSLSLQDIKTADWSPFVAPFWPAVIRSALTWKGLTSLFRSGLKTVKGALAMPLMIKGYKKDLIKFAIITCRKPK* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0570 298 Gene3D Vaccinia Virus protein VP39 22 296 IPR029063 -
Apr5g0570 298 Pfam Methyltransferase domain 81 179 IPR013216 GO:0008168
Apr5g0570 298 Coils Coil 3 23 - -
Apr5g0570 298 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 5 293 - -
Apr5g0570 298 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 297 IPR029063 -
Apr5g0570 298 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 1 298 IPR025774 GO:0008168|GO:0032259
Apr5g0570 298 CDD AdoMet_MTases 80 182 - -
Apr5g0570 298 PANTHER METHYLTRANSFERASE 5 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0570 Apr-Chr5 7834264 7838418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0570 78 192 Acyl Lipid Metabolism Gene Families AT1G73600 32.174 3.95e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0570 K05928 - gmx:100792443 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0570 5 7834264 7838418 Apr5g0570 5 7834264 7838418 ECH