Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0567 ATGAGTTTGAGCACTGGCGGAATCCACACACCGTGTAGCAGTGTAAGGGATGCAATGAAGCCCTTCAGAATCTTCGTGGGGTATGATCCACGTGAAGACATTGCCTTTGAGGTTTGCCGCCACTCCATATTGAAGAAGTCTTCAATCCCTGTTGAGATCATACCAATCAAGCAATCAGATCTAAGAAAAAATTGCTTGTATTGGCGCGAAAAGAACCAATTAGAGAGCACAGAGTTCTCCTTTTCAAGATTCTTAACTCCTTACTTAGCCAACTACGAGGGTTGGGCAATGTTTGTGGACTGTGATTTCTTGTACTTAGCAGATATTAAGGAGCTGAGAGACATGGTTGATGACAAGTATGCTGTCATGTGTGTTCAACATGAATATGCCCCAAAGGAGACCACAAAGATGGATGGAGCAGTGCAAACTGTGTACCCAAGAAAGAATTGGTCTTCAATGGTGTTGTATAATTGTGGGCATCCCAAGAACCGTGTTTTGATTCCAGACATTGTTAACACACAGACTGGTGTATTTCTTCATAGGTTTCAATGGCTTGAGGATAATGAAATTGGGTCCATCCCATTTGTTTGGAACTTTCTTGAGGGGCATAACAAGGTTGTGAAGAATGACCCGAGTACTTTCCCCAAGGCCATCCATTATACACGTGGGGGACCATGGTTTGAAGCTTGGAAGAACTGTGAATTTGCTGATCTCTAG 717 0.4324 MSLSTGGIHTPCSSVRDAMKPFRIFVGYDPREDIAFEVCRHSILKKSSIPVEIIPIKQSDLRKNCLYWREKNQLESTEFSFSRFLTPYLANYEGWAMFVDCDFLYLADIKELRDMVDDKYAVMCVQHEYAPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNRVLIPDIVNTQTGVFLHRFQWLEDNEIGSIPFVWNFLEGHNKVVKNDPSTFPKAIHYTRGGPWFEAWKNCEFADL* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0567 238 SUPERFAMILY Nucleotide-diphospho-sugar transferases 19 237 IPR029044 -
Apr5g0567 238 PANTHER EXPRESSED PROTEIN 12 238 - -
Apr5g0567 238 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 12 238 IPR029044 -
Apr5g0567 238 PANTHER - 12 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0567 Apr-Chr5 7774490 7775829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0567 - - jre:109004307 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0567 5 7774490 7775829 Apr5g0567 5 7774490 7775829 ECH