Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0555 ATGGTAGCCGAAAGAAACGTTGGGAATCATGGAGAAGGAACCCTAATATTCACCTATGGAACCTTAAAAAGAGGCTTCTCCAACCACCCCCTTCTGCAAGACCTCATCCGCTCCGGCGACGCCTCCTTCGTCGGAAACTACCGCACCGCCCATAATTACCCTCTTGTTTGTGGGCCCTACCGTGTTCCCTTCCTCCTCAACCTTCCCGGGTCGGGTAACCGGGTTCACGGCGAGCTCTACTCTGTCTCCTCCCGCGGTCTCGCACGCATGGATGAGCTTGAGGGCACCACACGCGCCCATTACGAGCGTCTCCCGATCAAGCTTGTCCCCGCCGGCGACGGCGAGGGGGAAGAGGGGGGCGATGGAGAGGAGGCGGCGGCGGGGCTAACGTGCGCGGAGGCGTATTATGCGCATAGGAATTACGCGATGGAGCTGTGGAAGAAGAACGGAAAGCGAGGGTTTAGATGTTATTCGGAGAAAGAAGCGTTAGGTTATGTGAAGCGCAAAGATAGGCCTCAACATTTGACCTTCCTCGATCACATTCGCTTGTTCCTTTCCAATTGA 564 0.5621 MVAERNVGNHGEGTLIFTYGTLKRGFSNHPLLQDLIRSGDASFVGNYRTAHNYPLVCGPYRVPFLLNLPGSGNRVHGELYSVSSRGLARMDELEGTTRAHYERLPIKLVPAGDGEGEEGGDGEEAAAGLTCAEAYYAHRNYAMELWKKNGKRGFRCYSEKEALGYVKRKDRPQHLTFLDHIRLFLSN* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0555 187 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 15 138 IPR036568 -
Apr5g0555 187 PANTHER TROPONIN C-AKIN-1 PROTEIN 10 186 IPR039126 GO:0061929
Apr5g0555 187 PANTHER BNACNNG06060D PROTEIN 10 186 - -
Apr5g0555 187 Gene3D - 14 171 - -
Apr5g0555 187 CDD GGCT_like 16 110 IPR013024 -
Apr5g0555 187 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 16 136 IPR009288 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0555 Apr-Chr5 7568589 7569414 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0555 K19761 - gmx:100802936 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0555 5 7568589 7569414 Apr5g0555 5 7568589 7569414 ECH