Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0549 ATGTCTCTGTCTCTTCTTCGTCTCTCTTCTTCGCCGCACCTTTCAACCTCTCTTCTCCTTCCAACACCAACCCTTTTCCCTTCTTTCCTCTTTCATCTTCCTCTTACCCCCAAATGCCTCCAAATCACGCGAAGAGGCCCCTCCGTTTCCGCTTACTCGCGTGGAGTCCCAGAGCGTGCAGAATATGACGCTGCAAGTGAAGATGATGATGAAGAAGAAGAAGAACCCATGAGGGCTATTTACGAAGAAGAAGTTTTACCTGAAAGATGGGATGTATTGGGTCTCGGTCAAGCCATGGTAGACTTCTCTGGCACGGTTGATGATAATTTCCTCAAAAATTTGGGATTAGAGAAGGGAACGCGGAAAGTTGTAAATCATGAAGAAAGAGGTAGAGTTTTGCAGGCTATGGATGGGTGCAGCTATAAGGCTGCGGCTGGTGGATCCCTTTCTAATACCTTAGTTGCCTTGGCAAGGCTTGGAAGCCGCTCTGTCGAAGCTCCCGCTATAAATGTGGCAATGGCTGGGAGTGTAGGAAGTGATCTATTGGGTGGCTTCTACAGGGAAAAATTACGCCGAGCAAATGTGCAATTTCTTTCTGCACCTATCAAGGATGGGACAACTGGAACAGTCATAGTTCTCACAACTCCAGATGCCCAGCGCACAATGCTTGCATACCAGGGCACTTCCTCAACTGTTAACTGTGATGCATCCTTGGCTAGTGTAGTTTCCAAGACCAACATCCTTGTGGTTGAAGGGTATTTATTTGAACTTCCTGATACCATTAAAACAATAACTAAAGCATGTGAGAAAGCGCGGAGGAATGGTGCCTTGGTTGCAATAACAGCTTCAGATGTCTCCTGCATCGAGAGACATTTCGATGATTTCTGGGAAATAATTGGGAATTGTGTGGATTTGGTGTTTGCAAATGGTGATGAGGCCAGAACTCTGTGTAATTTTGAAGCAAAGGAAAATGCTGCTTCAGCTGCAAGGTATCTGAGCCACTTTGTTCCTCTAGTATCGGTTACCGATGGTCGCAAAGGCTCTTACATAGGTGTAAAAGGTACAGCTGTATATATCCCTCCTTCTCCATGTGTTCCAATAGATACTTGTGGTGCTGGGGATGCTTATGCATCTGGCATACTCTATGGTCTCTTAAGAGGCATATCAGATTTGAGAAGTATAGGAACAATAGCAGCTAAGGTTGCAGCCACTGTTGTTGGACAACAAGGAACAAGGCTTAGAATTTCAGATGCAGTCAAATTGGCTGAATCTTTCGCATTTCAACTTGATTCCTCTATTCGATCCGATGTTGGTACTGATCACATTTCTAGTGTCTAA 1338 0.4507 MSLSLLRLSSSPHLSTSLLLPTPTLFPSFLFHLPLTPKCLQITRRGPSVSAYSRGVPERAEYDAASEDDDEEEEEPMRAIYEEEVLPERWDVLGLGQAMVDFSGTVDDNFLKNLGLEKGTRKVVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGSRSVEAPAINVAMAGSVGSDLLGGFYREKLRRANVQFLSAPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNCDASLASVVSKTNILVVEGYLFELPDTIKTITKACEKARRNGALVAITASDVSCIERHFDDFWEIIGNCVDLVFANGDEARTLCNFEAKENAASAARYLSHFVPLVSVTDGRKGSYIGVKGTAVYIPPSPCVPIDTCGAGDAYASGILYGLLRGISDLRSIGTIAAKVAATVVGQQGTRLRISDAVKLAESFAFQLDSSIRSDVGTDHISSV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0549 445 PANTHER KINASE, PUTATIVE, EXPRESSED-RELATED 66 436 - -
Apr5g0549 445 MobiDBLite consensus disorder prediction 50 76 - -
Apr5g0549 445 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 368 381 IPR002173 GO:0016773
Apr5g0549 445 Gene3D - 99 225 - -
Apr5g0549 445 Pfam pfkB family carbohydrate kinase 141 413 IPR011611 -
Apr5g0549 445 Gene3D - 93 410 IPR029056 -
Apr5g0549 445 CDD adenosine_kinase 89 414 - -
Apr5g0549 445 PANTHER HEXOKINASE FAMILY MEMBER 66 436 - -
Apr5g0549 445 SUPERFAMILY Ribokinase-like 90 413 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0549 Apr-Chr5 7501337 7505259 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0549 - - gmx:100816996 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0549 5 7501337 7505259 Apr5g0549 5 7501337 7505259 ECH