LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g0545	ATGGCTTCAAAATCTAGATCCAATCTATCTGAAAATCCCAACAAAGCATCACTGGCAACTCCAAGAGCCAAAGTTAGCAAAGCAGTGTCCAAATCAGAATCTGAATCGCCATCACCTTTGCAAAACTCGCGCCATTCTGTCGAACGATCGCCACGGTCGGTGAATTCGAAGCCCACTGTCGAACGGAAATCGCCAAGACCTGCCTCCACCCCACCTGATAAACAGCCCCCAAGAACTGCAAAGGGTTCAGAGTTGCAGAACCAATTGAATGTTGTTCAAGAAGATCTAAAGAAAGCAAAGGAACAGCTCATTCAGGCTGAGAAGGAGAAGGTAAAAGCAATTGAAGAGTTGAAAACAGTGCAGAGAGCGGCTGAGGAAGCAAATGAGAAACTCAGGGAAGCATTGGTGGCTCAAAAACGGGCTGAGGAGGATTCTGAGATTGAGAAATTCCGAGCTGTTGAATTGGAACAGGCAGGAATTGAAACAGTGAAGAAGAAGGAAGAAGAATGGCAAAAAGAGATCGAGAGTGTGAAGAACCAACATGCTCTGGATGTGGCTGCTCTTCTCTCCACCACTCAGGAGCTTCAGCGGCTTAAACAAGAACTTGCCATGACTAGTGATGCAAAGAACCAGGCACTGAATCATGCTGATGATGCAACTAAAATTGCCGAGATTCATGCAGAGAAAGCAGAGTTCTTTTCTGCTGAACTGACCCGGTTGAAGGCCTTACTAGATTCAAAACTGGAAACCGAGGCTAGTGAAAATAAACTTGTATTGAAGCTGAAAACGGAGATAGAAGCTCTCAAGCAAGAACTTGAAAAGGCAAAGGGTTATGATGAGAAGTTGACTGAGAAAGAAACTTCTATTGAACAACTTAATGTGGAGCTTGAAGCCTCAAAGATGGCCGAATCTTATGCACGTAGCCTGCTAGAGGAGTGGCATAAGAAGGTTGAGGAACTAGAAATGAAGGTTGAAGAAGCAAACAAGATGGAGAGATCTGCATCAGAATCTTTGGAATCTGTAATGAAACAGCTAGAAGGAAACAATGATTTGTTCCATGAAGCAAAATCTGAAATTGCTACTCTTAAAGAGAAGGTGGGTTTATTAGAAATGAAAATTAGGAGACAAAGAACAGATCTTGAGGATTCAGAACGTCAACTTCTTATGGCTAAGGAAGAAAGTCTTGAAAATTCAAAGAAAGTTGAGTCTCTGAAATCTGAACTTGAGACAGTTAGGGAAGAGAAAGTCCAAGCTTTGAACAATGAGAAGCTTGCAGCTTCAAGTGTGCAGGACCTATTAGAAGAGAAAAACAAACTTATCAATGAATTGGAGAATTCTAGGGATGAAGAAGAAAAGAGTAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCTAGAGAAGCCAAAGAAAATCTACTAAACATCCAGGCTGATCGTGAAAGCTATGATACCCAGATTGAAGATTTAAAGTTAGTCCTAAAAGCCACTAATGAAAAATATGAGTCCATGCTTGATGATGCACGGCACGAGATTGATGTTCTTGTATGTAGTATTGAAAATTCTAAGAATGTCTTTGAGAACTCCAAAGCAGATTGGGAGCAGAGAGAACTTCATCTAGTCAACTGCTTAAAGAAAAATGAAGAAGAAAATGTGTCCCTTGAAAAAGAAATAAAAAGATTAGTGTATTTGCTTAAAGAAACCGAGGAAGAAGCGAATGCCAACAGAGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCGATCCAACTGCAGGAAGCTCTTAAGGAAGTAACAGCTGAGAACATGAAATTGAAGGAGAGCTTATTGGATAAAGAAAATGAATTGCAGAATATGTTTCAAGAAAATGATGAACTCCGAGCTAGGGAAGCTGATTCTTTTAAGAAGGTGGAGGAGTTATCTAAGTTGCTGGAAGAAGCTACAACCAGAAACCACACTGAGGAAAATGGAGACCTTACAGACAGTGAGAAGGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGACATGGAGCGGAGGATATTTCAAAGGTGGAACTTGAAGTCAATCAGGAGGAGGGACAACAAAGCTCACGGGAAGAACATAATATTCTCTTGAATGAAGAGGCTGAAAAAATCGAATCTCCAAAACCTGATGATGTGAATGGAAAACTGAAGGAAGATGAGAGGAAAGAAAAGGATGATTCTGCAGAAGTTGCATTTAAAATGTGGGAAAGCTGCAAGATAGAGAAAAAGGAGTTCTCTCCAGAGAGAGAAGCAGAGCCTGAATCATTGGAAGAGGAAGTTGACTCAAAGATAGAAGGTGGTGAGAGCTTTGATAAGATAAATGGAGGCTCTTTAACAGAGAACATTGATGATGGTGGGAGCTCACCATCAAAACAGCAACAATTGAAGAAAAAGAAGAAGCCTTTGCTTGGAAAGTTTGGAAGCCTGCTCAAGAAAAAGGGGGCTAGCAACCATAAATAG	2529	0.4096	MASKSRSNLSENPNKASLATPRAKVSKAVSKSESESPSPLQNSRHSVERSPRSVNSKPTVERKSPRPASTPPDKQPPRTAKGSELQNQLNVVQEDLKKAKEQLIQAEKEKVKAIEELKTVQRAAEEANEKLREALVAQKRAEEDSEIEKFRAVELEQAGIETVKKKEEEWQKEIESVKNQHALDVAALLSTTQELQRLKQELAMTSDAKNQALNHADDATKIAEIHAEKAEFFSAELTRLKALLDSKLETEASENKLVLKLKTEIEALKQELEKAKGYDEKLTEKETSIEQLNVELEASKMAESYARSLLEEWHKKVEELEMKVEEANKMERSASESLESVMKQLEGNNDLFHEAKSEIATLKEKVGLLEMKIRRQRTDLEDSERQLLMAKEESLENSKKVESLKSELETVREEKVQALNNEKLAASSVQDLLEEKNKLINELENSRDEEEKSKKAMESLASALHEVSAEAREAKENLLNIQADRESYDTQIEDLKLVLKATNEKYESMLDDARHEIDVLVCSIENSKNVFENSKADWEQRELHLVNCLKKNEEENVSLEKEIKRLVYLLKETEEEANANREEEAQLKENLKEVEAEAIQLQEALKEVTAENMKLKESLLDKENELQNMFQENDELRAREADSFKKVEELSKLLEEATTRNHTEENGDLTDSEKDYDLLPKVVEFSEENGHGAEDISKVELEVNQEEGQQSSREEHNILLNEEAEKIESPKPDDVNGKLKEDERKEKDDSAEVAFKMWESCKIEKKEFSPEREAEPESLEEEVDSKIEGGESFDKINGGSLTENIDDGGSSPSKQQQLKKKKKPLLGKFGSLLKKKGASNHK*	843

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g0545	842	Coils	Coil	366	393	-	-
	Apr5g0545	842	PANTHER	SYNAPTONEMAL COMPLEX PROTEIN-RELATED	4	839	-	-
	Apr5g0545	842	Coils	Coil	426	512	-	-
	Apr5g0545	842	Coils	Coil	310	337	-	-
	Apr5g0545	842	MobiDBLite	consensus disorder prediction	816	842	-	-
	Apr5g0545	842	Coils	Coil	549	639	-	-
	Apr5g0545	842	PANTHER	WEB FAMILY PROTEIN-RELATED	4	839	-	-
	Apr5g0545	842	Coils	Coil	82	148	-	-
	Apr5g0545	842	MobiDBLite	consensus disorder prediction	1	19	-	-
	Apr5g0545	842	Pfam	Weak chloroplast movement under blue light	83	642	IPR008545	-
	Apr5g0545	842	Coils	Coil	401	421	-	-
	Apr5g0545	842	MobiDBLite	consensus disorder prediction	797	815	-	-
	Apr5g0545	842	MobiDBLite	consensus disorder prediction	765	842	-	-
	Apr5g0545	842	Coils	Coil	160	180	-	-
	Apr5g0545	842	MobiDBLite	consensus disorder prediction	1	90	-	-
	Apr5g0545	842	MobiDBLite	consensus disorder prediction	30	63	-	-
	Apr5g0545	842	Coils	Coil	188	215	-	-
	Apr5g0545	842	Coils	Coil	251	302	-	-
	Apr5g0545	842	MobiDBLite	consensus disorder prediction	688	752	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g0545	Apr-Chr5	7430921	7435028	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g0545	-		-	gmx:100777446	1263.44

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr5g0545	5	7430921	7435028	Apr5g0545	5	7430921	7435028	ECH