Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0543 ATGGCGAGTTGGTATACTTCACATAAACACTTGAACTGCGTTTTGAAGAGAGAGAAGATGTTTGGGCAACTTGAGCATGAGCTAGAGCTGCACGTGCCGGCAAGTGAGGCATGGGATCTCTTTGGTACCCTTCGAATAGGAAAACTCGTTGAGCAAGAGTTGCCTGAACTGTTCCACAAGGTTGAGTTAACCCAAGGAGATGGAGGGGTTGGCACTGTCCTCAAGCTAAGTTTCGCTCCAGGTGTGCCTGGACCTGCTGTTTACAAAGAGAAGTTCACCAAGATTGATAATGAGAAGCGCATAAAAGAAACAGAGGTAGTGGAAGGAGGGTACTTGGAGTTGGGATTCACTCTCTTTAGAGTTCGTTTTGAAGTAATTGAGAAAGGTGAAGAGTCGAGCATAATCAAATCTACAATCGAGTATGAACTCAAGGAAGAGGATGCATCCAACGCCTCGCTTGTTTCTGTCCAGCCAGTGGCAACCATTGCACAACTCGCCAAGAATTACCTCAACAAGGCTGCAAAAGAACCAAAACAGTAA 540 0.4574 MASWYTSHKHLNCVLKREKMFGQLEHELELHVPASEAWDLFGTLRIGKLVEQELPELFHKVELTQGDGGVGTVLKLSFAPGVPGPAVYKEKFTKIDNEKRIKETEVVEGGYLELGFTLFRVRFEVIEKGEESSIIKSTIEYELKEEDASNASLVSVQPVATIAQLAKNYLNKAAKEPKQ* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0543 179 Pfam Pathogenesis-related protein Bet v 1 family 22 154 IPR000916 GO:0006952
Apr5g0543 179 SUPERFAMILY Bet v1-like 22 152 - -
Apr5g0543 179 Gene3D - 11 174 IPR023393 -
Apr5g0543 179 CDD Bet_v1-like 22 147 - -
Apr5g0543 179 PANTHER S-NORCOCLAURINE SYNTHASE 2-LIKE 22 174 - -
Apr5g0543 179 PANTHER - 22 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0543 Apr-Chr5 7422413 7423239 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0543 - - aprc:113865782 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0543 5 7422413 7423239 Apr5g0543 5 7422413 7423239 ECH