Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0519 ATGGATTGCGGCGTGGGATCCATCGTTTGGGTGCGACGGAGGAACGGGTCGTGGTGGCCGGGTCAAATACTCGGCCCCGACGACCTCTCCGCTTCTCATCTCACCTCTCCTCGATCAGGAACTCCCGTCAAGCTTCTCGGCAGGGAAGACGCCAGCGTGGATTGGTACAATTTGGAGAAATCCAAGCGTGTCAAGGCATTTAGATGTGGCGAGTTTGATGATTGTATTGAAAGGGCTGAATCCTCCCAGGGGATGCCGTTGAAAAAACGAGAGAAATATGCTCGCCGAGAGGATGCCATTCTTCATGCTCTTGAACTGGAGAGACAAATGTTGAAGAAGCAAGGGAAATCAGGTATTACTTCTGATCAAATCAATTGTAGATCGTCAAATACTGTTAGAAAGGGCATAGGTACGTTGCCGTCGGAGATACTGGGAAATGATAATGAAAAACATGCAAATTCAAAGTCATTTATGGCTTGTGAAAATGAGACTACTGGAGGTTCTTTTCCTTTGGAGGTAGCCAAGGATGGCAGTCAACTGAGTGGGGAAGTAGATTATTCTGAAACAATACCTCGGATGAGAGACCTACAGGATTTTGGACTCAAAATTGCCCCCTTGAAAAGGAAGCTTTCATCTTCTTTTGATCCAAACATTTCTCAGAAACTTGCTGTTGATGATGGTGCTCGGGCTCTTGCAAGTGGTGATCTTTGCATGGGGACTACACTTCACATGAATGGAGCTGGGCAAGTAGGGGGAGCTTGCCGGGCAAAGAGGAGCAGATGCATGTATTTTCCAGTCGAGTCTAGTGATTCTCTTGATTATAAAGAGACTCTAGCCCATGTTGAGATGTCATCTTCCCAACTCAGAAGGGAGTTTCCTTATCATGGTTCTTTGTTTGGAGAGACTGAATCTGCTTTTATGGATGATGTTGGATCTGATTCTTCAGAAACAGCTTCTACTGAGTCTGATTCAGATTCTTCTGAGACAGAACCAGACATGGATGAAGAGATGACTATCTTTTCAGAAACTGGTCGTGGTGCTGAAGAACACGAAAGCACTAGCAGTGAGGATCCAGATGAATTAGCGATTTCTGGTGATATGCCTCACCTCTATCCTCGTGACCAAATTACATGTAATGAAGCTGTGTCTAAATGGAAACTAAAAGGAAAAAGGAATAATCGTAATCTTGTAAAGAGGTCTGTTGGTGCTTCTGATAGAAAATGTATTATGTATGGAGCAGAAGGTGATGCTGAAGGAAGAAGTTATTTGAACCACAAAAGAATGGGTCCAAGTTTCAATTGCTACAAAAATGATTTTAATGATGCTCTTGATGATGATGATGATGAAATGTTTGGATTGGAAGATGAATACTCTCTAGCTTCTAGAGCTATATCAAGAAGTCAAAATAAAATTCATCGTGGTGTTTCTTGGAATGATTGGGCCTGGGATGATCATCTTGCTTCTAAAGGATATTGGGATATTAAAGGATATTCTCCAAAATATGGTGATCGTCATCATTTTGGTGGGAAGATGAGGTCGATGCTAGTTAATGTAGATTTGAAGGTGCAAGCAAGCTATCGGAAAGAGCCTGTACCCATTGTTTCTCTCATGAGTAAGTTAGATGGGAGGGCAATAATAGGGCACCCGATCCAAGTTGAAGCTCTCAAAGATGGTTCATCTGATGTTCTATTTCCTGCAATGGATGACTTCAGTAATGATGGGATTGGTATTGAGGGAAGTAGTGTGCTTACACCAGCATGGAGTACTGCAAGGAGAACAGCAAACTTTCGCGTCCCACGATCCCATGTATCATCATCAAATGGTGCTGAAGTTGCTGCAGAGTTTCCTTCCTCAGATCAAGAACAAAACTTTGAATACAAAAAATTAAATGCCGGAAGTTCCAGTCACAAGGCTAGCTTTCAAAAGAAGAGTGCCCTTAAAAGTCATCGGTCTTCAGCTGACAAAAAGTCCTTAAAAAAGATGCCAAAGAAATTGAGTTTGTCATCTAGCCAGAAAACTAGAACTCTCTCCTCATTATCTACTGAACATAATCTTAGTAGAAAGACATTATTACATGATAGCGGTAGTTATCAAACAGAGAGATTGATTAAACCAGCAATATCTGGGCCCCCTACAGTAGCTTGCATACCAGTCCAGTTAGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCTCCATTGAAAGCAGCTAATAATGCGGCTTTGCTGAATACTGGTGTGGAGAGAAATTCATAG 2256 0.422 MDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIERAESSQGMPLKKREKYARREDAILHALELERQMLKKQGKSGITSDQINCRSSNTVRKGIGTLPSEILGNDNEKHANSKSFMACENETTGGSFPLEVAKDGSQLSGEVDYSETIPRMRDLQDFGLKIAPLKRKLSSSFDPNISQKLAVDDGARALASGDLCMGTTLHMNGAGQVGGACRAKRSRCMYFPVESSDSLDYKETLAHVEMSSSQLRREFPYHGSLFGETESAFMDDVGSDSSETASTESDSDSSETEPDMDEEMTIFSETGRGAEEHESTSSEDPDELAISGDMPHLYPRDQITCNEAVSKWKLKGKRNNRNLVKRSVGASDRKCIMYGAEGDAEGRSYLNHKRMGPSFNCYKNDFNDALDDDDDEMFGLEDEYSLASRAISRSQNKIHRGVSWNDWAWDDHLASKGYWDIKGYSPKYGDRHHFGGKMRSMLVNVDLKVQASYRKEPVPIVSLMSKLDGRAIIGHPIQVEALKDGSSDVLFPAMDDFSNDGIGIEGSSVLTPAWSTARRTANFRVPRSHVSSSNGAEVAAEFPSSDQEQNFEYKKLNAGSSSHKASFQKKSALKSHRSSADKKSLKKMPKKLSLSSSQKTRTLSSLSTEHNLSRKTLLHDSGSYQTERLIKPAISGPPTVACIPVQLVFSRLLEKINRPPLKAANNAALLNTGVERNS* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0519 751 MobiDBLite consensus disorder prediction 635 683 - -
Apr5g0519 751 MobiDBLite consensus disorder prediction 308 322 - -
Apr5g0519 751 Gene3D - 1 116 - -
Apr5g0519 751 MobiDBLite consensus disorder prediction 307 372 - -
Apr5g0519 751 MobiDBLite consensus disorder prediction 338 352 - -
Apr5g0519 751 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 2 142 - -
Apr5g0519 751 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 245 749 - -
Apr5g0519 751 PANTHER T17B22.17 PROTEIN-RELATED 245 749 IPR044679 -
Apr5g0519 751 PANTHER T17B22.17 PROTEIN-RELATED 2 142 IPR044679 -
Apr5g0519 751 MobiDBLite consensus disorder prediction 663 683 - -
Apr5g0519 751 MobiDBLite consensus disorder prediction 323 337 - -
Apr5g0519 751 Pfam PWWP domain 6 86 IPR000313 -
Apr5g0519 751 ProSiteProfiles PWWP domain profile. 5 60 IPR000313 -
Apr5g0519 751 SUPERFAMILY Tudor/PWWP/MBT 4 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0519 Apr-Chr5 6065909 6069681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0519 - - aprc:113864977 1410.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0519 5 6065909 6069681 Apr5g0519 5 6065909 6069681 ECH