Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0513 ATGACGACGTCGTTTGGAGCATCTACGTCCACCGCGGCGCTCAAGGACCCCAAGGTTCAGATCCCGAGCTTCCATGGCTTGAGGTCTGCTTCCGCCTCCGCTCTCACTCGCAATGCTCTTTCGCTTCCTTCATCCACGCGCTCGCTCTCTCTCATACGCGCTGTTTCCACGCCTGCAAAGTCTGAAACTGCCGCGGAGAAGCGCAGCAAAGTAGAAATATTCAAAGAACAAAGTAATTTCATAAGATACCCTCTTAATGAGGATTTGTTGACTGATGCCCCTAATATAGGCGAAGCTGCCACTCAATTGATCAAGTTTCACGGTAGCTATCAACAGTACAATAGAGATGAGCGTGGTTCCAGAAGCTACTCTTTTATGATACGTACTAAGAACCCTTGTGGGAAAGTTTCAAACCAACTTTACTTGACTATGGATGATCTTGCTGACCAGTTTGGAATTGGGACCCTTCGTTTGACCACCAGACAAACATTTCAGCTTCATGGTATTCTCAAGAAGGACCTTAAAACAGTGATGAGCACCATTATTCGAAATATGGGCTCAACCCTTGGTGCATGTGGTGACCTAAACAGAAATGTGCTTGCTCCTGCTGCTCCCCTTTTGAGAAAAGATTACGTCTTAGCTCAACAAACTGCAGAAAACATTGCCGCCCTCCTGGCTCCTCAGTCTGGGTTTTACTATGATATTTGGGTAGATGGGGAAAGGTTTTTGTCGTCAGAACCACCTGAAGTAGTTCATGCACGGAATGATAATTCTCATGGTACAAACTTCCCAGATTCACCCGAGCCCATCTATGGAACTCAGTTCTTGCCAAGGAAATTCAAAATTGCAGTTACTGTGCCAACTGATAACTCGGTGGATATTCTCACGAATGATATTGGTGTTGTTGTTGTTACTGATGATGATGGGGAGCCTCAAGGGTTCAACATATATGTTGGTGGTGGAATGGGAAGAACTCATAGGTTGGAAACCACTTTTCCTCGCTTGGCTGAACCATTAGGTTATGTACCAAAAGAGGATATTTTGTATGCAGTGAAAGCAATTGTTGTTACACAACGAGAAAATGGGAGAAGAGATGACCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCTTGGGGAATCGAGAAGTTTAGAAGTGTAGTTGAGCAATATTATGGCAAGAAATTTGAACCTTTTCGTCAATTGCCAGAATGGGAATTTAAAAGTTATCTTGGGTGGCATGAACAGGGTGATGGCAAGTTATTTTATGGGCTTCATGTTGATAATGGTCGTATTGGTGGAAAGATGAAAAAGACATTGCGGGAGGTTATTGAGAAATATAATTTAAATGCACGAATCACTCCAAATCAGAACATCATCTTGACTGATATTCGTGCTGCATGGAAGCGTCCAATTACAACCACTCTAGCTCAAGCTGGTCTGCTGCAACCTAGATTTGTAGATCCCCTCAACATAACAGCAATGGCATGCCCTGCTTTTCCATTATGTCCACTAGCAATTACTGAAGCAGAACGTGGGATACCTAACATTCTTAAGCGGATTCGAACTGTTTTTGAGAAGATTTGGCTTGGAGGAAACACCAAACAAACATCGTTAGCTCGAAGTTTCATGGACAAGGTGAAGGTTCTAGACCTTGAAAAAGTTTTGGAGCCTTTGTTTTATTATTGGAAGCAAAAGCGTCAATCTAAAGAATCATTTGGCGACTTCACAAACCGAATGGGATTTGTGAAGCTTAAAGAACTTGTTGAGAAATGGGAGGGTCCAGTAGTAGCACCAGCACGCCACAACCTAAAGCTATTTACTGACAAGGAGACATACGAAGCAATGGATGAATTGGCAAAGCTTCAAAACAAGAGCGCTCATCAGTTGGCCATGGAAGTTATCCGCAATTATGTTGCTTCCAACCAAAATGGGAAAGGTGAATGA 1947 0.4309 MTTSFGASTSTAALKDPKVQIPSFHGLRSASASALTRNALSLPSSTRSLSLIRAVSTPAKSETAAEKRSKVEIFKEQSNFIRYPLNEDLLTDAPNIGEAATQLIKFHGSYQQYNRDERGSRSYSFMIRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGILKKDLKTVMSTIIRNMGSTLGACGDLNRNVLAPAAPLLRKDYVLAQQTAENIAALLAPQSGFYYDIWVDGERFLSSEPPEVVHARNDNSHGTNFPDSPEPIYGTQFLPRKFKIAVTVPTDNSVDILTNDIGVVVVTDDDGEPQGFNIYVGGGMGRTHRLETTFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSYLGWHEQGDGKLFYGLHVDNGRIGGKMKKTLREVIEKYNLNARITPNQNIILTDIRAAWKRPITTTLAQAGLLQPRFVDPLNITAMACPAFPLCPLAITEAERGIPNILKRIRTVFEKIWLGGNTKQTSLARSFMDKVKVLDLEKVLEPLFYYWKQKRQSKESFGDFTNRMGFVKLKELVEKWEGPVVAPARHNLKLFTDKETYEAMDELAKLQNKSAHQLAMEVIRNYVASNQNGKGE* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0513 648 Gene3D Sulfite Reductase Hemoprotein, domain 1 192 401 IPR045854 -
Apr5g0513 648 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 414 467 IPR005117 GO:0016491
Apr5g0513 648 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 124 180 IPR005117 GO:0016491
Apr5g0513 648 Gene3D Sulfite Reductase Hemoprotein;Domain 2 402 483 - -
Apr5g0513 648 Gene3D Sulfite Reductase Hemoprotein, domain 1 526 595 IPR045854 -
Apr5g0513 648 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 411 483 IPR036136 GO:0016491
Apr5g0513 648 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 490 602 IPR045854 -
Apr5g0513 648 TIGRFAM sir: sulfite reductase, ferredoxin dependent 59 527 IPR011787 GO:0020037|GO:0050311|GO:0051539
Apr5g0513 648 PANTHER BNAA01G31570D PROTEIN 527 594 - -
Apr5g0513 648 PANTHER BNAA01G31570D PROTEIN 1 528 - -
Apr5g0513 648 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 527 594 IPR045169 GO:0016491|GO:0020037|GO:0051536
Apr5g0513 648 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 1 528 IPR045169 GO:0016491|GO:0020037|GO:0051536
Apr5g0513 648 Pfam Nitrite and sulphite reductase 4Fe-4S domain 218 396 IPR006067 GO:0016491|GO:0020037|GO:0051536
Apr5g0513 648 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 66 192 IPR036136 GO:0016491
Apr5g0513 648 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 193 408 IPR045854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0513 Apr-Chr5 5932675 5937081 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0513 K00392 - gmx:547693 1185.24