Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0506 ATGGCTTCGCTTCTACCTCTCTTCCACACCTTCCCATCTCTTTCCCAACCATATCACCTTTCAACTCCATCATCATCATTCAAATCCACACTCCTCTTCCTTCCAATTGCCAGCAACAAACCTTCACCCACCCTGAAATGCTCTTCCACTACCCCCGAGACCCACTTGGACCCACAACTTGAATTCGAAACATCATCATCATCATCCTCAGAACCTCCACTGAGCCAAGTATGGAGGGAAATCCAAGGAAGCAACGACTGGGAAGGGCTCATAGACCCCACGAACCCCCATCTCCGCCGAGAAATTATCCGCTACGGCGAACTCGCACAAGCCTCATACGACTCCTTCGACTTCGACCCTCACTCCAAATACTGCGGAACATGCAAATACCACCCCTCACACTTCTTTCAGAAACTCAATATGTCCCACATCGGATACACCATCACGCGCTACCTCTACGCAACCTCCAACATCAACCTCCCTAACTTCTTCCAGAAATCCAAACTCACCAGCGTGTGGAGCCCACACGCCAACTGGATGGGTTACGTGGCAGTAACCACCGACCCAGAACAAATCAAACGTTTGGGTCACCGCGACATAGTCATTGCATGGCGAGGAACTGTCACCTACGTCGAATGGATTTACGACCTCAAAGACATTCTCCGCCCTGCACTCTTCACCAACGACCCATCCATCAAAATCGAATCAGGTTTCTACGATTTATACACCAAGAAAGAAGATTCTTGCAGCTATTGCTCTTTCTCTGCTCGCGAACAAATGCTCTCCGAGGTTAAGCGGCTTCTTCAGTACTACCAAGAAGAAGAAATCAGCATCACCATCACAGGGCACAGTCTCGGTGCTGCCTTGGCTATAATCAGTGCTTACGACATAGCAGAGCTTAGGTTAAACGTTGTTGAAGATGGAGAAAGAAGTTCTAAAATCCCTGTCACGGTTTACTCCTTTGCAGGGCCCAGAGTGGGGAACTTGAAGTTCAAAGAACGGGTTGAGGAGCTTGGGGTTAAGGTGTTGAGGGTGATAAACGTGCATGATATGGTACCCACCGTGCCGGGGATAATAACCAACGAGAAGTTTCAGTTTCAGAAGTACATAGAAGACGCGTTGTGTTTTCCGTGGAGCTATGCGCACGTGGGGACGGAGTTTGCGTTGGATCACACGTGCAGCCCGTTTTTGAAAACAACGAATGATTTGGGGTGTGCGCATAACTTGGAGGTTCATTTGCATCTGGTGGATGGGTATCATGGGAAGGGAGAGAGGTTCCGATTGGCCTCGAAAAGGGACATAGCGCTTGTGAACAAGAGCTGTGACTTCCTGCGGAACGAGTACGGTGTTCCGCCCTATTGGCGACAGGAGGAGAACAAGGGAATGGTGAGAAGCGGAGACGGCCGGTGGGTGTTACCGGACCGACCGAGATTGGAGGCTCATCCGCCGGATACGGCGCACCATCTTCAGCAAGTGTTGAAGAACCACCGTGCGGCGAGTGAGCAATTAGAAGCCACGTGA 1521 0.5049 MASLLPLFHTFPSLSQPYHLSTPSSSFKSTLLFLPIASNKPSPTLKCSSTTPETHLDPQLEFETSSSSSSEPPLSQVWREIQGSNDWEGLIDPTNPHLRREIIRYGELAQASYDSFDFDPHSKYCGTCKYHPSHFFQKLNMSHIGYTITRYLYATSNINLPNFFQKSKLTSVWSPHANWMGYVAVTTDPEQIKRLGHRDIVIAWRGTVTYVEWIYDLKDILRPALFTNDPSIKIESGFYDLYTKKEDSCSYCSFSAREQMLSEVKRLLQYYQEEEISITITGHSLGAALAIISAYDIAELRLNVVEDGERSSKIPVTVYSFAGPRVGNLKFKERVEELGVKVLRVINVHDMVPTVPGIITNEKFQFQKYIEDALCFPWSYAHVGTEFALDHTCSPFLKTTNDLGCAHNLEVHLHLVDGYHGKGERFRLASKRDIALVNKSCDFLRNEYGVPPYWRQEENKGMVRSGDGRWVLPDRPRLEAHPPDTAHHLQQVLKNHRAASEQLEAT* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0506 506 Pfam Lipase (class 3) 201 358 IPR002921 GO:0006629
Apr5g0506 506 Coils Coil 486 506 - -
Apr5g0506 506 MobiDBLite consensus disorder prediction 42 75 - -
Apr5g0506 506 Gene3D alpha/beta hydrolase 77 484 IPR029058 -
Apr5g0506 506 PANTHER PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC 47 494 - -
Apr5g0506 506 SUPERFAMILY alpha/beta-Hydrolases 99 420 IPR029058 -
Apr5g0506 506 CDD Lipase_3 151 393 - -
Apr5g0506 506 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 47 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0506 Apr-Chr5 5766039 5767609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0506 74 493 Acyl Lipid Metabolism Gene Families AT1G51440 74.884 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0506 - - gmx:100795661 800.045