Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0485 ATGAGACCTCAGAGAACTTCGATCCACGCCATCACCACATGGGTGAGGCGACAACCCCCAAAGGTCAAAGCTTTTCTCTCCGTCGTTTCCGGCATGGCGGCTCTCGTCCTACTTCGCTTCATCGTTCACGACCACGACAACCTCTTCGTCGCCGCCGAGGCTGTCCACTCCCTCGGAATTTCCGTCCTCATCTACAAGCTCATGAAGGAGAAGACTTGTGCCGGGTTATCACTCAAATCCCAGGAATTAACAGCTATCTTTTTAGCTGTTAGGCTGTACTGCAGTTTTGTCATGGAATATGATATACACACCATACTTGACTTTGCTACTTTCGCAACAACTCTGTGGGTTATATACATGATTCGTTTTAAACTGAAGGCTAGTTACATGGAGGAGAAGGATAACTTTGCAATATACTATGTGGTGATACCCTGTGCTGTGTTAGCCTTGCTTATTCATCCATCAACTTCTCATCATTTATTGAACAGGATTTTCTGGGCCTTCTGTGTATATCTTGAAGCTGTTTCAGTCCTACCCCAATTGCGTGTCATGCAGAACACGAAAATTGTTGAGCCATTCACAGCTCATTACGTATTTGCTCTGGGAGTTGCAAGATTCTTGAGCTGTGCTCATTGGGTTCTTCAGGTATTAGATAGCCGTGGACATTTGTTGGTTGCCTTGGGGTACGGTTTATGGCCGTCAATGGTTCTTATCTCAGAAATTGTCCAGACCTTCATCTTAGCAGATTTCTGTTACTATTATGTCAAAAGTGTTTTTGGGGGACAGCTTGTTCTTCGCCTTCCTTCTGGAGTGGTGTGA 819 0.453 MRPQRTSIHAITTWVRRQPPKVKAFLSVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDFATFATTLWVIYMIRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHLLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0485 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g0485 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g0485 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g0485 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g0485 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g0485 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g0485 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g0485 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0485 Apr-Chr5 4950434 4953323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0485 5 272 Miscellaneous Gene Families AT2G21190 88.060 2.33e-180 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0485 - - gmx:100803652 535.413