Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0470 ATGGAGGGAAAAGGAACAGCAACAGGGTGTTACAAGTGTGGCAGACCCGGTCACTGGTCCCGTGATTGCCCTTTCTCTGCCCCCAATTCAAACCCTAATAGTAACAGCGCCACCAATCCCAAGCCTTCTTCCGCCAGATCTGCCTCCGACAAGCCCAAGAAGCTCCCCCGAACCAGGCCCAAACTCACTCCCGATCTTCTTCTTTCCGACGACGGCCTCGGTTACGTCCTTCGCTATTTTCCTCGCGAGTTCAAATACCGTGGTCCTGGCCACGAGGTTCGTGATTTGGGTAATCTGCTTCAGTTGTACTCCGAATGGCACTCTCGCTTGCTCCCTTACTACTCTTTCCATCAATTTATTCACAAAGTGGAGAAAGTTGCTGCCACCAGGCGTGTAAAGACTTGCCTTAGAGAATTGAGAGAAAGAGTTGCAAGTGGTGGAGATCCAACAAAACTGCGTGAACCACCACCAGTTATGGATGACACTCCAGCTGATGAACAAGATGGGGGAGCAAGTCATCAAGAGAGAGACATGTTTGCAGAATCTGAAAATGTTGACATTCAAGACGACATTCTTAATGATATATATGAAAAAGCTACTGAAGAACCTTCTCAGTCCACACATAATGAGGTTGGCGCTATTATGGCTTCCAATAGTAGAGCAATTGAAAAGACATCAAAGGAAGTCCCAAATAATGGAGCCAGTCAGTCCGGCAGAGCTGAGATAACAGACGAGCAGAGAGCTCGTATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGTGCTGCTCGAGCTGCCTTATCACAGGCCCCCTAA 816 0.4853 MEGKGTATGCYKCGRPGHWSRDCPFSAPNSNPNSNSATNPKPSSARSASDKPKKLPRTRPKLTPDLLLSDDGLGYVLRYFPREFKYRGPGHEVRDLGNLLQLYSEWHSRLLPYYSFHQFIHKVEKVAATRRVKTCLRELRERVASGGDPTKLREPPPVMDDTPADEQDGGASHQERDMFAESENVDIQDDILNDIYEKATEEPSQSTHNEVGAIMASNSRAIEKTSKEVPNNGASQSGRAEITDEQRARMEANRLKALERRAARAALSQAP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0470 271 MobiDBLite consensus disorder prediction 22 64 - -
Apr5g0470 271 PANTHER TIMELESS-INTERACTING PROTEIN 6 267 - -
Apr5g0470 271 Pfam Zinc knuckle 9 24 IPR001878 GO:0003676|GO:0008270
Apr5g0470 271 Gene3D - 6 61 - -
Apr5g0470 271 SUPERFAMILY Retrovirus zinc finger-like domains 7 26 IPR036875 GO:0003676|GO:0008270
Apr5g0470 271 SMART c2hcfinal6 9 25 IPR001878 GO:0003676|GO:0008270
Apr5g0470 271 MobiDBLite consensus disorder prediction 24 46 - -
Apr5g0470 271 MobiDBLite consensus disorder prediction 200 246 - -
Apr5g0470 271 PANTHER TIMELESS INTERACTING-RELATED 6 267 IPR040038 GO:0000076
Apr5g0470 271 MobiDBLite consensus disorder prediction 144 174 - -
Apr5g0470 271 Pfam Replication Fork Protection Component Swi3 61 142 IPR012923 GO:0005634|GO:0006974|GO:0048478
Apr5g0470 271 ProSiteProfiles Zinc finger CCHC-type profile. 10 24 IPR001878 GO:0003676|GO:0008270
Apr5g0470 271 MobiDBLite consensus disorder prediction 205 241 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0470 K10904 - gmx:100808422 373.629