Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0462 ATGGCTACTCTGCAATTCACATTCACTGATTCAACCTCCTTCTTCAGACCTTCTCTTCCCTACAAGTCTCTCTCTCTCACTCGAAATCGAACCTTCCTTGTAAAAGCTTCTTCTCTTCCCCACTTATCCAGAAGCAGAAGAAGTTTCATCGCCGAAACCACCGCTATTTCGCTCTCTCTCCCTCAGTTAGCAAGGTCCGAGGAATCGCTTTCAGAGTGGGAACGAGTTTACCTCCCTATCGACCCTGGCGTCGTGCTTCTCGACATCGCTTTTGTCCCCGACGACCCCAACCACGGCTTTCTTCTTGGAACGAGGCAAACCATTCTGGAGACAAAAGATGGAGGAAACACTTGGGCTCCGCGTTCAATTCCCTCTGCTGAAGACGAAGATTTCAACTATAGGTTCAATTCTATCAGCTTCAAAGGCAAGGAAGGATGGATTGTTGGAAAGCCTGCGATTCTTTTGTACACTGCTGATGCTGGAGAAAGTTGGGAAAGGATGCCTCTCAGTGCTCAACTTCCAGGGGATATGGTATACATAAAGGCAACCGGTGAGAAGAGTGCAGAGATGGTGACTGATGAAGGTGCAATTTATGTTACTGCAAACAGAGGCTACAATTGGAGGGCTGCTGTCCAGGAAACTGTGTCAGCTACTCTTAATAGAACAGTTTCTAGTGGTATTAGTGGTGCTAGCTACTACACTGGAACTTTCAATACTGTCAATCGTTCTCCAGACGGAAGGTATGTTGCTGTCTCGAGTCGTGGCAATTTCTACTTAACCTGGGAGCCTGGTCAGCCATTCTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTGTGGCTTCTTGTTCGTGGAGGTGGCCTTTATCTCAGCAAGGGCACAGGGATAACTGAAGAATTTGAGGAGGTTCCTGTTCAAAGCCGGGGTTTTGGCATTCTTGATGTGGGGTATCGTTCAACTGACGAGGCTTGGGCAGCAGGCGGAAGTGGTATTCTCTTGAGAACTACTAATGGTGGAAAGTCATGGATCCGGGACAAAGCTGCTGACAGCATTGCTGCAAATTTATACTCAGTGAAGTTTATTGATGATAAAAAGGGATTTGTGTTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1176 0.4745 MATLQFTFTDSTSFFRPSLPYKSLSLTRNRTFLVKASSLPHLSRSRRSFIAETTAISLSLPQLARSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTADAGESWERMPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRDKAADSIAANLYSVKFIDDKKGFVLGNDGVLLRYLG* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0462 391 Gene3D - 127 356 IPR015943 GO:0005515
Apr5g0462 391 PIRSF Photosystem_II_Ycf48-like 36 391 IPR016705 -
Apr5g0462 391 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 41 391 - -
Apr5g0462 391 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 72 390 - -
Apr5g0462 391 Pfam Photosynthesis system II assembly factor YCF48 68 389 IPR028203 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0462 - - gmx:100810566 719.153