Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0448 ATGGCGAAAGAGGGAAACAACATTGATGAAGTGAATGACACATTGGATAATATGGAAGAAGCAGCAGAAGCAGAAGAAGCTGGAGAATTAGAAGAAGGAGAAGAGGAAGATGACGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAAGGAGAGTATACTTTCAGGTTCAAGAATGGAATGAGCCCTTTGGACTTTGTCGATAATAATGATTCTGGCGTTCAAAGCTACCGGCAATTCGAACGCCTTGAACACGAAGCCCTCGCCGATAAAAAGCGAAAGGCGAATGAACAATGCGACAGTGAAGGACCCTCTTCTAAGAAGGCAAGGGAAGATGATATTTCTGGGGCAACCATAGCTGAGATAATGGAAGCAATGAATTATGGTGGGCGCAAGAGATCACGAAAGCCTAAAAAAAGAGGTAGGCGGAAAGGATCAAAGAATAAACTCGACCCTAAGCTAACACGAATGCTGGGTGATGCCACACTTCACTATGCATGTGGCCATTATGACAAGGCTATAGCTGTGTTGCATGAAGTTGTTAGGCTGGCACCAAATTTGCCTGATTCGTATCACACCCTTGGACTTGTCTATAGTTCACTTGAGGATTATAAAAGAGCTATGGATTTTTACATGATTGCTGCTCATTTGACTCCAAAAGATTCATCTCTTTGGAAATTGCTATTTACCTGGTCCATAGAACAAGGTGATATTGGTCAAGCCAGTTATTGTCTTTCAAAAGCAATAACAGCAGACCCCAAAGATATTACTCTTAGAAATCATCGTGCGATGCTCTATGTTGAACTTGGAGATTATCAAAAAGCTGCTGCGGCATATGAGCAAGTACATCAACTCTGTCCTAAGAATGTTGATGCAATGAAAGCAGCAGCTAAGTTCTACAAAAAATGTGGACAAGTTGAATGCTCTGTTCGTATTCTTGAAGACTACCTTAAGAGTCAAACTGATGGAGCAAATGAGCGTGTAGTTGATCTGCTGGGTGCCATATTGATGGAAACTAAGGCGCATGACAAAGCTCTTCAGTATATTGAACATGCTCAAGTGGTAAATGCAGGGAAAGAATTGCCTTTGTATTTGAAAATTAAAGCTGGAATCTGCCATGTTCATCTTGGAAACATGGAGATGGCTCAGGTTCAGTTTAATGATTTGAAGCCAGAGAATGCAAATGAGCATGTGGCCTTGGTTACTGAGGTTGCAGACGCATTAATGGGTCTTGAGCATTATAATTTTGCATTGAATTATTATCTGATGTTGGAAGGAAATAGTGGAAATGAAAATGGTCTTCTATATCTGAAAATTGCTAGATGTTATCAGTCCTTGAAAGAAAGGTCACAGGCAATTCTCTTTTTTTCCAAAGTCCTAGAAACTCTAGAAGATGATGTTGATGCACGCATAACTTTGGCTTCCCTTCTACTTGAAGAAGGAAAAGAAGATGAAGCCATTTCCTTGCTGTCTCCTCCAAAGGACTCCGACTCTGGAGAAGCTCATTCTGGAAAGTCACATAGATGGTGGGTTGATGCAAGAATAAAACTGAATCTCTGCAGCATATATCGGAATAGAGGGATGCTTGATGATTTTGTGGATGCAATTTTCCCTTTGATACGTGAATCACTGTATGTTGCAACTCTTCGACAGAAGGGTAAATCAAAAAAGCGCCTCTCCAAAAGAGATCTGGTTGAAAGGGTTAGGGTACTAGATGGTCCAGAAAAGGATAATGTATTTAGAGGCTTCAGGCCAGTAGCTACACCGTCTGATCTGTTGAAAGCTTCCCGGGCAAAAAAGCTGCTGCAGAAGAAGGCAATCCTAAAGGAGAAAAGAAAAGCTGAGGCACTGGCCTCCGGACTTGACTGGCTAAGTGATGATTCAGATGATGAGCCTCAGAAAGAAAACAGAGAACCTCCCTTGTGTAATCTTCTCAAAGATGAAGAACACCACCAGCTAATCATTGATTTGTGCAAGGCATTAGCATCCTTGCAAAGGTATTGGGAAGCACTGGAAATTATTAATCTTACTCTAAGATTGGCTCATATGTCTCTGTCTACTGAGAAGAAGGAGGAGCTTCGATCTCTTGGAGCTCAAATGGCATACAACACCACAGATCCTAAGCATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACACCCACACAGTGTTGCAGCTTGGAATTGCTACTACAAGGTTATGTCAAGATTGGAAAACCGAGATACAAGACACTACAAATTTGTACGTGTTATGCAAGGAAAATTTGTGGATTCTGTGCCTCCCATTCTCATTTCTGGGCATCAGTTTACCTTATTTAGCCATCATCAAGACGCAGCAAGGAAATACCTAGAAGCTTATAAACTATTGCCAGAGAATCCCTTGGTTAATCTTTGTGTTGGAACGGCCTTGATCAACTTAGCATTGGGTTTCAGACTTCAAAATAAGCATCAATGTGTTGTACAAGGTTTGGCATTCCTCTACAATAATTTGAGAATCTGTGAGAACAGCCAGGAATCACTGTACAACATAGCTCGGGCATACCATCATGTTGGTCTAGTAACTCTGGCTGCTTTATACTACGAGAAAGTAATTGCTATTCACGAGAGAGACTATCCAATTCCAAAACTTCCCAATGAAAATCCAGATGTCATCGAAAATCATAAACCTGGTTACTGCGACCTTCGGAGGGAGGCAGCTTATAATTTGCATTTAATCTACAAAAAGAGTGGAGCTCTTGATCTTGCTAGGCAAGTCCTAAAAGATCACTGTTCCTTGTGA 2790 0.4118 MAKEGNNIDEVNDTLDNMEEAAEAEEAGELEEGEEEDDVEEEEEEEEEEEEEEGEYTFRFKNGMSPLDFVDNNDSGVQSYRQFERLEHEALADKKRKANEQCDSEGPSSKKAREDDISGATIAEIMEAMNYGGRKRSRKPKKRGRRKGSKNKLDPKLTRMLGDATLHYACGHYDKAIAVLHEVVRLAPNLPDSYHTLGLVYSSLEDYKRAMDFYMIAAHLTPKDSSLWKLLFTWSIEQGDIGQASYCLSKAITADPKDITLRNHRAMLYVELGDYQKAAAAYEQVHQLCPKNVDAMKAAAKFYKKCGQVECSVRILEDYLKSQTDGANERVVDLLGAILMETKAHDKALQYIEHAQVVNAGKELPLYLKIKAGICHVHLGNMEMAQVQFNDLKPENANEHVALVTEVADALMGLEHYNFALNYYLMLEGNSGNENGLLYLKIARCYQSLKERSQAILFFSKVLETLEDDVDARITLASLLLEEGKEDEAISLLSPPKDSDSGEAHSGKSHRWWVDARIKLNLCSIYRNRGMLDDFVDAIFPLIRESLYVATLRQKGKSKKRLSKRDLVERVRVLDGPEKDNVFRGFRPVATPSDLLKASRAKKLLQKKAILKEKRKAEALASGLDWLSDDSDDEPQKENREPPLCNLLKDEEHHQLIIDLCKALASLQRYWEALEIINLTLRLAHMSLSTEKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPHSVAAWNCYYKVMSRLENRDTRHYKFVRVMQGKFVDSVPPILISGHQFTLFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCVVQGLAFLYNNLRICENSQESLYNIARAYHHVGLVTLAALYYEKVIAIHERDYPIPKLPNENPDVIENHKPGYCDLRREAAYNLHLIYKKSGALDLARQVLKDHCSL* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0448 929 Coils Coil 30 53 - -
Apr5g0448 929 MobiDBLite consensus disorder prediction 92 120 - -
Apr5g0448 929 Pfam Tetratricopeptide repeat 271 337 - -
Apr5g0448 929 MobiDBLite consensus disorder prediction 13 54 - -
Apr5g0448 929 Gene3D Tetratricopeptide repeat domain 159 331 IPR011990 GO:0005515
Apr5g0448 929 MobiDBLite consensus disorder prediction 1 75 - -
Apr5g0448 929 ProSiteProfiles TPR repeat profile. 191 224 IPR019734 GO:0005515
Apr5g0448 929 SMART tpr_5 191 224 IPR019734 GO:0005515
Apr5g0448 929 SMART tpr_5 329 362 IPR019734 GO:0005515
Apr5g0448 929 SMART tpr_5 157 190 IPR019734 GO:0005515
Apr5g0448 929 SMART tpr_5 259 292 IPR019734 GO:0005515
Apr5g0448 929 SMART tpr_5 436 469 IPR019734 GO:0005515
Apr5g0448 929 SMART tpr_5 841 874 IPR019734 GO:0005515
Apr5g0448 929 SMART tpr_5 225 258 IPR019734 GO:0005515
Apr5g0448 929 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 18 928 IPR039340 GO:0006383
Apr5g0448 929 Pfam Tetratricopeptide repeat 164 223 - -
Apr5g0448 929 Coils Coil 1 28 - -
Apr5g0448 929 SUPERFAMILY TPR-like 769 924 IPR011990 GO:0005515
Apr5g0448 929 SUPERFAMILY TPR-like 166 491 IPR011990 GO:0005515
Apr5g0448 929 MobiDBLite consensus disorder prediction 92 154 - -
Apr5g0448 929 Gene3D Tetratricopeptide repeat domain 592 929 IPR011990 GO:0005515
Apr5g0448 929 ProSiteProfiles TPR repeat profile. 259 292 IPR019734 GO:0005515
Apr5g0448 929 MobiDBLite consensus disorder prediction 135 150 - -
Apr5g0448 929 Gene3D Tetratricopeptide repeat domain 332 544 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0448 171 303 Glycosyltransferase AT3G04240 26.316 1.44e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0448 K15201 - gmx:100804533 1481.46