Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0439 ATGATTCTTCAACAACCTTCTTCTTCTTCCACTTTCTCTCCCATTCTCTCTTCCCTCTGTCCCTGCAACAATGAACTCGCTACATTCCCCTTATCCAGAAGAAGGAGGAAACGCTTAATTGCCAATTTTGGCTATCGCAAATTCCGAAGAAAATGCACCGTTCGTTTCTGCGCACTTCCCACAGATTCTTCCAACAGAAATTGGAACGGCGACTTCGGGAATTCCGCCAGGAGGAGTGCCAGAAGTTTCGTTTTGAGACGAGTATCGAACGAACTCGAGGGGGAGAGTGTGAACGACCGCGAATCACAAGAGTCACCGGTTCAATTAGGTTCCAACTTCACCGGATTCCAAGAAGATCCTATTGTAGATAAGCTTAGAACGCAATTAGGGGTTATACATCCAATTCCATCGCCTCCGATTAACCGCAACGTGGTTGGTTTGTTCGTGTTTTTTTTCTTCGTTGGAGTTGTTTTTGATAAATTGTGGACTTCGAGGAGGAGGAACAAAGTTAACAGTGAAGATAGGTTGCGTGGTGTGTGGCCACAGGTTCCCACGAGCTTCTCCTTGTTTTTGGAAAAGGATTTGCAGAGGAAAGAGTCGGTGGAATGGGTGAATATGGTGCTGGGAAAGTTGTGGAAGGTGTATAGAGGTGGGATTGAGAATTGGATCATAGGGTTGCTTCAGCCTGTTATTGATAACCTGAAGAAGCCTGATTATGTGCAGAGGGTTGAGATTAAGCAGTTCTCCTTAGGGGATGAGCCGTTGTCTGTTAGGAATGTTGAACGCAGGACTTCTCGCCGGGTGAACGATTTGCAGTACCAGATAGGCCTTCGGTATACTGGTGGCGCTCGGATGCTGTTAATGCTTTCTCTGAAATTTGGTATCATTCCAATTGTTGTACCTGTCGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTAAGACTAATACCCACAGAACCTTGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTTCCTAAAATCAAGTTTGAACTTTCTCCATTCCGACTGTTCAATTTAATGGCAATTCCAGTTCTCTCAATGTTTTTGACAAAACTTCTCACTGAAGATTTACCTAGACTATTTGTCCGCCCCAAGAAAATTGTTTTGGATTTCCAAAAGGGAAAAGCTGTTGGTCCAGTTGCTGATGATGTTAAATCTGGAGCAATGCAAGAAGGAAACAAGGATTCTGTTGGTGAACTATCTGTTACTCTGGTGGATGCTCGAAAGCTTTCTTATATTTTCTATGGCAAGACAGATCCTTATGTTATTCTTAGCGTTGGAAATCAGGTTATACGCAGCAAAAAGAACAGTCAAACTACAGTAATTGGCCCCCCTGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTTTCCAACCCTAAAAAGCAGAAATTATTCATCCAAGTAAAGGACGCTTTAGGATTTGTAGATTTGACCATTGGCACCGGAGAGGTTGATTTGGGATCTCTTAAAGACACCGTACCAACAGACAGAATTGTGGTTTTGCAAGGAGGTTGGGGAGTTTTGGGAAAGCGCTCTTCTGGGGAGATATTACTTCGGCTAACATATAAAGCATATGTGGAGGATGAGGAAGATGACAAAACTGTGTTGGATTCCATTTACACTGATGCTTCAGATGATGAGTTGTCTGATTCAGAAGCAAATGTCACTAATGAGAAGGATGAAAGAGAGACTGTGTATGAAACAGATAAAGAGTCATTTATGGATGTTTTGGCTGCATTAATTGTTAGTGAAGAATTTCAAGGGATAGTAGCATCTGAAACAGGGTTTAGCAAAGTTTTGGATAATGGCTCAAGTACTGGGTCTAAAGTGTCAAAATCTCCGGTTCCCAATGCTGAATCAATTCCTTCTGGTTTGGATAATTCTGACGGTTCTGGAGGGTCAGGTTTATTTTGGCTTGCTGTGATTACTAGCATATCACTACTAATTGCTCTCAATATTGGCGGTTCAAGTCTCTTCAATCCTTAA 2028 0.4241 MILQQPSSSSTFSPILSSLCPCNNELATFPLSRRRRKRLIANFGYRKFRRKCTVRFCALPTDSSNRNWNGDFGNSARRSARSFVLRRVSNELEGESVNDRESQESPVQLGSNFTGFQEDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVVFDKLWTSRRRNKVNSEDRLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVQRVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPRLFVRPKKIVLDFQKGKAVGPVADDVKSGAMQEGNKDSVGELSVTLVDARKLSYIFYGKTDPYVILSVGNQVIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPKKQKLFIQVKDALGFVDLTIGTGEVDLGSLKDTVPTDRIVVLQGGWGVLGKRSSGEILLRLTYKAYVEDEEDDKTVLDSIYTDASDDELSDSEANVTNEKDERETVYETDKESFMDVLAALIVSEEFQGIVASETGFSKVLDNGSSTGSKVSKSPVPNAESIPSGLDNSDGSGGSGLFWLAVITSISLLIALNIGGSSLFNP* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0439 675 Gene3D C2 domain 391 539 IPR035892 -
Apr5g0439 675 Pfam C2 domain 410 506 IPR000008 -
Apr5g0439 675 ProSiteProfiles C2 domain profile. 391 513 IPR000008 -
Apr5g0439 675 SMART C2_3c 411 512 IPR000008 -
Apr5g0439 675 MobiDBLite consensus disorder prediction 566 580 - -
Apr5g0439 675 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 197 384 IPR031468 GO:0008289
Apr5g0439 675 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 29 675 - -
Apr5g0439 675 MobiDBLite consensus disorder prediction 617 640 - -
Apr5g0439 675 MobiDBLite consensus disorder prediction 558 580 - -
Apr5g0439 675 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 410 540 IPR035892 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0439 427 547 Acyl Lipid Metabolism Gene Families AT4G13550 31.148 4.44e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0439 - - gmx:100806668 1092.03