Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0437 ATGGGTTCTCGAACCCTAATGGACATGTTCGAACCTGTTTCCAAGCGCTTGAAACCAACTCTCACCCCAACCAACGATGTCAATGGCAATGCCAATGCCAATGCCAATGCAAATGCCTCCACACTCTCCGTTCTCCAAAAGTCCCGCATCGAATACAACAAGCTTCTCGCCAAGTCCAAGAGGAATCGCAAACTCTGCGTCCAAAGGGTCTCCAAAAGCAAAGGTTTAGGACTAGGAGGCGTGAAACTAGAGGAGTTGCTGGTGGAGGAAACGTGGTTGGAAGCTCTCTCAGGAGAACTCCAAAAGCCCTATGCTGTCAATCTCTCTAAGTTTGTGGAGAATGATTTTTGCAGCGGCGACGACGTCGTTTACCCTCCTTCGCACTTGATTTTCAACGCTCTTAACTCTACCCCTTTTCACAGAGTTAAGGCTGTAATCCTTGGCCAGGACCCTTATCATGGACCTGGTCAAGCAATGGGGCTTTCGTTCTCGGTTCCTGAAGGAGTCAAAGTTCCTTCCAGTTTGGTCAATATATTCAAGGAACTTCACCAAGACCTTGGATGCTCCATTCCACCTCATGGGAATCTCGAAAAATGGGCCCTGCAGGGTGTTCTTTTACTCAATGCTGTTCTTACAGTCAGGAAGCATCAAGCAAATTCTCATGCTAAAAAAGGCTGGGAACAATTTACTGATGCTGTTATCAAGACAATCTCACAGAAGAAAAAAGGAGTTGTGTTTTTGTTGTGGGGAAACTCTGCTCGGGAGAAATCTAGGTTAATTGATGCAACAAAGCATCATGTTCTTAAAGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGCACTAACCAACTTCTGGAGCAAGAGGGGATTGATCCCATAGATTGGCAACTATAA 924 0.4621 MGSRTLMDMFEPVSKRLKPTLTPTNDVNGNANANANANASTLSVLQKSRIEYNKLLAKSKRNRKLCVQRVSKSKGLGLGGVKLEELLVEETWLEALSGELQKPYAVNLSKFVENDFCSGDDVVYPPSHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELHQDLGCSIPPHGNLEKWALQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKKGVVFLLWGNSAREKSRLIDATKHHVLKAAHPSGLSANRGFFGCRHFSRTNQLLEQEGIDPIDWQL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0437 307 TIGRFAM ung: uracil-DNA glycosylase 90 298 IPR002043 GO:0004844|GO:0006281|GO:0006284
Apr5g0437 307 PANTHER URACIL-DNA GLYCOSYLASE 2 307 IPR002043 GO:0004844|GO:0006281|GO:0006284
Apr5g0437 307 SUPERFAMILY Uracil-DNA glycosylase-like 86 307 IPR036895 -
Apr5g0437 307 SMART UDG_2 135 295 IPR005122 -
Apr5g0437 307 SMART UDG_2_a 135 295 - -
Apr5g0437 307 Hamap Uracil-DNA glycosylase [ung]. 89 306 IPR002043 GO:0004844|GO:0006281|GO:0006284
Apr5g0437 307 ProSitePatterns Uracil-DNA glycosylase signature. 143 152 IPR018085 GO:0006281|GO:0016799
Apr5g0437 307 Gene3D - 78 307 IPR036895 -
Apr5g0437 307 CDD UDG-F1-like 104 305 IPR002043 GO:0004844|GO:0006281|GO:0006284
Apr5g0437 307 Pfam Uracil DNA glycosylase superfamily 140 294 IPR005122 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0437 K03648 - gmx:100818241 488.804