Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0429 ATGTCGAAGCCCTGTGACTTGCAAATCAACATTGATGGTCAGCATTTCCTTTTGAAAGAGAAGATTATATCAAAATACTGTGGGAGGGTGAAGAAGATCTTGAATCATCAAAAGAGAAGATGTCATGAGAAGGACTTGAGAATTAGAATCAGTGATTTTCCTGGAGGCCCAGATGGGTTTGAACTAGTTTCAAGGTTCTGCTACAACAAAGGCAAAATTCCAATCACTGTGGCTAATGTGTCTCTCCTCCACTGCTGTGCCATTTATCTTGGAATGACTGAGGAGGTCTTCAGCAACAATCTCTTCCAACAAACAGAAAATTTTCTTGAGGGAATCTATTGCTGGAAATGGAATGACATACTTGTAAGTCTCATGAGTTGCCAACTGTTTTATGCATATGCAGATTGCTATGGTCTCTTGGAGAAGATCATTTATGCTCTCTTAGCAAAGATTGCTCAAAGTTCAGATACAAACCAACTCACTTCCTCATCTTCAGCATCATCATCATCTTCTTCACCAGAAAGCAATTCTGCTAAGAGATTCTCTTCTTCAACCAAAACAACCCCTGAAAAAATCAAGTCAACTTTGCCAAGCAAAGCATGGTGGTTTGATGATTTGGCAACTTTACCACCAAAGATCATTGAAAAACTTTTTCAGACTATTGGAGCATACAAAGCTGGTAACAATAACTTGATCCTTACAAGATTTCTGTTGCATTATCTGAAAATAGCTACACAAACCAAAGTGGTTACTAGTAGAAACAGCAATGAATACGCTGTTCTTGCAGAAACAGCTGCTTATGGGGTTGTAGTTGTTGGTAAAAAGACCTTTTCTTGCAGAGGTCTTTTTTGGGTGTTAAGGATTGTAACTGGGTTTGGGTTGAGTAGAGATTGCAGAACTGAATTGGAGAAATTGATTGGTGGCATGCTTGACCAAGCCACCTTGGATGATCTTCTGGTCTCTGGGCATGATATGGGAGTTTATTATGATGTTAATTTGGTGATAAGATTGGTTAGACTATTCGTTGATGTCAATGGCACTGATGGAGTGTCTTCACATAAACTGAAAAGGGTTGGTAGATTAATTGACAAGTATTTGAGAGAGATATCCCCTGACCAGAACCTCAAGATCTCTAAATTTCTCGGGGTTGCAGAATGCTTGCCAGACTCTGCAAGGGATTGCTACGATGGAGTTTACAAAGCCATTGACATCTATCTTGAGTCTCATCCAATTATCACATTTGAGGAAAGGTCGAGATTGTGTAGATGTCTTAATTACAGAAAACTCAGCTTCGAAGCCAGTAAAGATCTTGCCAAGAACCCAAGAATTCCTCCAAGGATTGCAATGCAGGCTCTTATTTCTCAACAATCACAAATTTCAACAAGTGACTTTGTACTTGAAACTCAAAGAAAGAAGTCTTCCCAAATAGTTTTGTACAATGAAGCCAAGAAAGACAACTTCTCCGAAGAGAAAAAAGATATGAGACTAAACCTAGAGAGATTGCAATGGAGAGTAGTAGAACTAGAGAAATTGCCCAAGGAAATGAAAGGTCAAGGGTCAAAGTTGTTTAGCCATAATGTCTTGTTTAATCATGAACACGCTAGAGCCTCGCCAAGATTTTGCTAA 1626 0.3911 MSKPCDLQINIDGQHFLLKEKIISKYCGRVKKILNHQKRRCHEKDLRIRISDFPGGPDGFELVSRFCYNKGKIPITVANVSLLHCCAIYLGMTEEVFSNNLFQQTENFLEGIYCWKWNDILVSLMSCQLFYAYADCYGLLEKIIYALLAKIAQSSDTNQLTSSSSASSSSSSPESNSAKRFSSSTKTTPEKIKSTLPSKAWWFDDLATLPPKIIEKLFQTIGAYKAGNNNLILTRFLLHYLKIATQTKVVTSRNSNEYAVLAETAAYGVVVVGKKTFSCRGLFWVLRIVTGFGLSRDCRTELEKLIGGMLDQATLDDLLVSGHDMGVYYDVNLVIRLVRLFVDVNGTDGVSSHKLKRVGRLIDKYLREISPDQNLKISKFLGVAECLPDSARDCYDGVYKAIDIYLESHPIITFEERSRLCRCLNYRKLSFEASKDLAKNPRIPPRIAMQALISQQSQISTSDFVLETQRKKSSQIVLYNEAKKDNFSEEKKDMRLNLERLQWRVVELEKLPKEMKGQGSKLFSHNVLFNHEHARASPRFC* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0429 541 MobiDBLite consensus disorder prediction 162 190 - -
Apr5g0429 541 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 515 - -
Apr5g0429 541 ProSiteProfiles NPH3 domain profile. 200 458 IPR027356 -
Apr5g0429 541 PANTHER OS12G0117600 PROTEIN 2 515 IPR043454 -
Apr5g0429 541 SUPERFAMILY POZ domain 3 94 IPR011333 -
Apr5g0429 541 Coils Coil 484 511 - -
Apr5g0429 541 Pfam NPH3 family 201 434 IPR027356 -
Apr5g0429 541 Gene3D Potassium Channel Kv1.1; Chain A 1 113 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0429 Apr-Chr5 4219877 4222469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0429 6 462 EF-hand Containing Proteins AT3G44820 26.285 1.36e-52 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0429 - - gmx:100808259 867.455