Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0425 ATGATAGATTCAAACCCTCCACTCATGCAACATTATGGAGCACTTGTGAGAAATTCTGCTGAAGCCCAACAAGCTAAAAGTTTTAGTGATCAAAACCATCCTTTGGTAGATGCTTATGACCTACCACTGATAGACCTTAGTGGTCTTAAAAGTTCTACTGAAAAAGAAAGGCTAGCTTGCACTTCAGCAATATGCAAAGCAGCATCAGAGTGGGGATTCTTCCAAGTGGTAAACCATGGCATAAGCCATGACCTACTAAGAAAGATGAGGGAAGAACAAGTGAAGTTGTTTTCTGTACCATTTGAGAGGAAGGTCACATGCGGGCTTCTAAATAACCCATATAGGTGGGGGACACCATCAGCTACTCGTTCAAATCAGTTTTCATGGTCAGAAGCTTTCCACATTCCTCTCACCATGATTTCAGAAACAGCTTGCTGGGGTGAATTCAGTTCTTTGAGGGAAGCAATAAATGAGTTAGCACCAGCGATGCTAGAAGTATCTAGTTTATTGGCGAGCATTCTAGCAGAAAACTTGGGCTACCCAAAGGATGCAGTTGAAAAACTCTGTGATGCTGGCACATGCTTTCTGAGATTAAATCATTATCCATGCTGCCCAAAATCTAAAGATCAAATTTTTGGATTAGTGCCTCACACTGACAGCGATTTCCTTACAATCCTTTATCAAGATCAAGTCGGTGGACTCCAACTCATAAAAGATTCCAAATGGGTCGCCATAAAACCAAACCCAAATGCTCTAATTGTTAACATTGGGGACCTTTTCCAGGCATGGAGTAATGACGAGTACAAAAGCGTGGAGCACAAGGTGGTGGCAAATGACAAAATGGAAAGATACTCCGTAGCATACTTCCTATGCCCTTCTTACAGTACTATCATAAACGGCTGCAAAGGACCTTCTATATATAGGAAATTCACGTTTGGAGAATACAGACACCAAATTCAAGAAGATGTCAAGAAAATAGGACACAAAATTGGACTATCAAAATTTCTACTTTAA 1014 0.4073 MIDSNPPLMQHYGALVRNSAEAQQAKSFSDQNHPLVDAYDLPLIDLSGLKSSTEKERLACTSAICKAASEWGFFQVVNHGISHDLLRKMREEQVKLFSVPFERKVTCGLLNNPYRWGTPSATRSNQFSWSEAFHIPLTMISETACWGEFSSLREAINELAPAMLEVSSLLASILAENLGYPKDAVEKLCDAGTCFLRLNHYPCCPKSKDQIFGLVPHTDSDFLTILYQDQVGGLQLIKDSKWVAIKPNPNALIVNIGDLFQAWSNDEYKSVEHKVVANDKMERYSVAYFLCPSYSTIINGCKGPSIYRKFTFGEYRHQIQEDVKKIGHKIGLSKFLL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0425 337 Pfam 2OG-Fe(II) oxygenase superfamily 195 292 IPR044861 -
Apr5g0425 337 PANTHER OS02G0630300 PROTEIN 23 329 - -
Apr5g0425 337 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 135 IPR026992 -
Apr5g0425 337 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 292 IPR005123 -
Apr5g0425 337 Gene3D - 11 325 IPR027443 -
Apr5g0425 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 329 - -
Apr5g0425 337 SUPERFAMILY Clavaminate synthase-like 35 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0425 Apr-Chr5 4164540 4167584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0425 36 315 Glycosyltransferase AT5G59530 31.894 4.00e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0425 - - gmx:100809329 643.654