Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0421 ATGAGTCTCGCCATTCTGCTCTGTTTCATCCTTTTCCCAGGTTTTGAAGCTGAAGCGTTATCCTATGATTACACTGCCAGCATCGAATGTTTGGCATACCCACATAAGCCTCAGTATAATGGAGGAATCATCCAAAACCCAGAACTGAATGATGGACTACAAGGGTGGACTCCATATGGGGGCTCAAGAATAGAACATAGAGAAACATCAGGTAACAAATATGTGGTAGCCCACGGCAGAAATAAAGTGCATGATAGTGTCTCCCAGAAGATTAACCTGAAGAAGGATAATCATTATACTTTATCCGCTTGGATACAAGTGAGTGAGGGAAATGTTCCCGTAACAGCAGTTGTAAAAACAAATGATGGATACAAATTTGCTGGTATCATTTTGGCCGAGTCAAATTGCTGGTCTATGCTTAAGGGTGGTTTCACAGCAGATACATCAGGAGCAGCTGAACTCTATTTTGAGAGCAACAGTACTTCTGTCGAAATTTGGATAGACAGCGTTTCGTTACAACCATTCACCGAAGAGGAATGGAGGTCTCATCAGTATCAAAGCATTGAGAAGGCTCGTAAGAGGAAAGCTCTAGTCCAAGTAGTAGATGAACAAGGAAAACCTTTACCAAATGCAAGCATAGCTTTTACACAGCTGAGGTCAGGCTTTCCATTTGGGAGTGCCATGAATAATTACATCCTGAACAATAGGTTATACCAAAACTGGTTCACCTCTAGATTCACAGTCACCACATTTGCAAATGAAATGAAGTGGTACAGCAATGAATATAGTCCAAGCAGGGAAAGCTACGCGGTTGCTGATAACATGCTGCAGTTTGCCAAGCAACACAATATTGCTGTTCGCGGCCATAATATATTTTGGGATGATCCTCATTATCAACCCAGTTGGGTTCCTTCACTCTCACCTTACCAGCTTAACTCAGCTGTGGAAAGGAGGTTGAGATCTGTTGTGTCGAGATATAGGGGCCAAGTTATTGCTTGGGATGTTGTTAATGAAAACCTTCACTTCTCATTCTTTGAAAGTAAACTTGGACTAAATTTTTCAGCCAGGATGTTCAATGAGGCTCACTATATTGATGGACAAGCCACTTTATTCTTGAATGAATATAATACCGTTGAGGATAGTAGAGATGGTGCATCAACCCCAGCAAGGTATGTCCAGAAGATCAGACAGATCCAAAGCTATCCTGGTAATAGGGGATTACCGATTGGAATTGGCCTCGAGGCCCACTTCCCTGGTTTTAGTGTTAACCTTCCCTACATGAGATCTTCCATTGATTACCTAGCTGCCACTGGTTTTCCAATTTGGATGACAGAAATAGATGTTGCAAACCAACCTAGGCAGACACAGAACTTCGAGCTTGTTCTTAGAGAAGCACACTCCCACCCAAGTGTTAGGGGCATTGTAATGTGGACAGCATGGTCACCACAAGGTTGCTATAAGATTTGCTTAGTAGATAACAATTTCAGGAACTTGCCTGCGGGGAATGTTGTGGACAAGCTACTTCATGAGTGGGGGCTAAGAAAAAAATTATCAGGGACGACAGACCAAAATGGGTTCCTTGAGGTCCCCCTTTTTCATGGCCACTATGAAGTGCAAATCACTCACCCTCTCAAGAATAACTACACTTTCACTCATCATGTACAAGTGACTCCAACACATCAGTCCAATGAATCAAGACAATTGATACATATTTCTCTGAAGTAA 1725 0.4232 MSLAILLCFILFPGFEAEALSYDYTASIECLAYPHKPQYNGGIIQNPELNDGLQGWTPYGGSRIEHRETSGNKYVVAHGRNKVHDSVSQKINLKKDNHYTLSAWIQVSEGNVPVTAVVKTNDGYKFAGIILAESNCWSMLKGGFTADTSGAAELYFESNSTSVEIWIDSVSLQPFTEEEWRSHQYQSIEKARKRKALVQVVDEQGKPLPNASIAFTQLRSGFPFGSAMNNYILNNRLYQNWFTSRFTVTTFANEMKWYSNEYSPSRESYAVADNMLQFAKQHNIAVRGHNIFWDDPHYQPSWVPSLSPYQLNSAVERRLRSVVSRYRGQVIAWDVVNENLHFSFFESKLGLNFSARMFNEAHYIDGQATLFLNEYNTVEDSRDGASTPARYVQKIRQIQSYPGNRGLPIGIGLEAHFPGFSVNLPYMRSSIDYLAATGFPIWMTEIDVANQPRQTQNFELVLREAHSHPSVRGIVMWTAWSPQGCYKICLVDNNFRNLPAGNVVDKLLHEWGLRKKLSGTTDQNGFLEVPLFHGHYEVQITHPLKNNYTFTHHVQVTPTHQSNESRQLIHISLK* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0421 574 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE 5 551 - -
Apr5g0421 574 PANTHER GLYCOSYL HYDROLASE 5 551 IPR044846 GO:0004553|GO:0005975
Apr5g0421 574 SUPERFAMILY (Trans)glycosidases 206 512 IPR017853 -
Apr5g0421 574 Pfam Glycosyl hydrolase family 10 220 480 IPR001000 GO:0004553|GO:0005975
Apr5g0421 574 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 212 507 IPR001000 GO:0004553|GO:0005975
Apr5g0421 574 SMART glyco_10 255 508 IPR001000 GO:0004553|GO:0005975
Apr5g0421 574 Pfam Carbohydrate binding domain 43 159 IPR003305 GO:0016798
Apr5g0421 574 Gene3D Glycosidases 211 517 - -
Apr5g0421 574 SUPERFAMILY Galactose-binding domain-like 40 173 IPR008979 -
Apr5g0421 574 Gene3D - 32 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0421 Apr-Chr5 4125449 4130156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0421 16 551 Glycoside Hydrolase AT4G33840 57.671 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0421 - - gmx:100775272 920.998