Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0415 ATGTTGAAGGATTTAGAAGTAGACGAGGTTTATGAGGAGGCAATGGAGCCGGAGGAGCAATTGCATGATCGGGGATCCAAACTCTATCCGGGCGATTGTGTTGTTGATAAGCACGAAGATACTGACACTGGTAGTGCATTGACTTCAGCTTTGGTGGATGAAAATCCGGATGCTGCCCAGGAGCCGGGTGACCAAGAGGATGCTACTGGGGTTGATACTGAGTCTGGGAAACTTGGGGAGACTGATTTAACTGCTACACTGGACTTGGAAAGGGATGGGCAGGGGATTGATAGTGTTCATCTGAATGGTGTTGATTCTGGAGGTCCCGTAGATGGAGAATTTTGTGATGAGTCCCATGGTACGAGGGATGATAATGTGAAGAGTAACGATTGGAGTGATGGAAAGGAAGAATCTGACTTAATTACTGATGGAGAGATGTTAGCTAAGGAGAATGGAGCCATGGTGGATGGAAACTCTGAATTGATGAATGACAGGACTGAAATTGATGATTCTGAATTCATGACTCCTAGAGAAAATGGTGGCACAAACATGGAAACCGGAAGCATAGACAAGGTGGACTATGTTGCTGATGAGTCTAATGCTGAATCTGAATCTGAATGTAACGAGGTGATTACAAACCAAGGTTCTGTTGCTACCAATTTGAAGGACAGTGTCTCAGATCCTGAACTTAAACATGACAAGATAGAGGTAAAGTTAAATGCTTCAAGTGAACCTTCTAGTGAGATTCAAGATGATACATGCCCAGAAGTACTTGACAATTTAGCTCATATGAATGTAGAACATCATGGTGAAGTAAATAGTGAGATGAAGGATGATGATTCTCTTGGCACTAATATAAGCCATGAGGATAGAAATGGCGAAGAAATGGGTGTATGTGGCATTCAGAGTACTGAATCAAGAGATTATGGAAATGAGGATGCTCAAGCTGGAAGCCTTTTGGAAAATTCGTCTACTGAGGAGACACAGCCTGTTCAGGCTAGTGCAGCTGATCCAAAGGAAGCAAATAATAAGGATTATCAATCTTTGATTCCTGATGAACAACATAGGCATTCTGACAAGTCTTCTGTGGTTGAGGAGCCTGAAAAGAAACAGGGGAAAAATATACAAGAGAAGGAAACCACTCAATTGACTAGAGAACAAAACGTTCAGCCTCCTGCAGGAATTTCTTCTTCATCTGAAAAATCTGCTGGTGCTGGATCCCCTCCAGTTCATCCAGCTGGTCTTGGCCGGGCAGCCCCATTACTGGAACCGGCATCTCGGGTAGTACAGCAGCCTCGTGCAAATGGTACTGTATCTAATGCTCAGTCCCAGCAAATGGAAGACTCCTCGAGTGGGGAGGCTGAAGAGTATGATGAGACGCGGGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGACTAGCTCATAGGCTTGGGCAAACACCCCACAATGTTGTTGTAGCTCAAGTTCTGTATAGATTAGGACTGGCTGAGCAACTCAGAGGAAGGAATGGGGGGCGTGTTGGTGCTTTTAGTTTTGATCGTGCAAGTGCAATGGCGGAGCAGCTTGAAGCAGCAGGTCAGGAGCCACTTGATTTCTCTTGTACAATAATGGTTCTTGGAAAGACAGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGATGAGGTTAAGTTTAATACTAGTGCTTTTCATATGGGAACAAAGAAGGTTCAGGATGTTGTGGGAACAGTGCAGGGCATTAGGGTACGGGTCATTGATACACCAGGACTGTTGCCTTCCTGGTCAGACCAGCGAAGTAATGAAAAGATTCTGCACTCTGTTAAGCACTTTATTAAGAAAACACCACCTGATATTGTGTTGTATCTTGATAGATTGGATATGCAGAGCAGGGATTTTAGTGATATGCCACTCTTACGCACAATTACTGAAATTTTTGGGCCATCCATTTGGTTCAATGCCATCGTGGTTTTGACTCATGCAGCATCTGCTCCACCAGAGGGCCCTAATGGTACTGCTTCCAGTTATGACATGTTTGTTACTCAGCGTTCTCTTGTTGTACAGAAAGCCATACGTCAAGCAGCCGGTGATGTGCGTCTCATGAATCCTGTATCATTGGTGGAGAACCACACTGCTTGTAGAACAAATAGGGCTGGCCAGAGAGTGTTGCCAAATGGCCAGGTTTGGAAACCTCATTTGTTACTTCTATCTTTTGCCTCTAAAATTCTGGCTGAAGCAAATGCCCTTCTCAAGTTACAAGATAGTCCACCTGGGAAGCCTTATATAGCTCGAGCAAGAGCGCCTCCATTACCTTTTCTTTTGTCAACCCTTCTCCAATCAAGACCACAATTAAAATTGCCAGAGGAGCAGTTTGGTGATGAGGACGGCCTTGATGATGACCTTGATGAATCATCAGAATCTGACGATGAAACTGAACTTGATGACTTGCCACCATTTAAACCTTTAACAAAGGCCCAGGTGGAAAAGCTGTCTAAAGCTCAGAAGAAAGCATATTTTGATGAGTTAGAGTATAGAGAGAAGCTTTTAATGAAGAAACAATTGAAGGAAGAAAAAAAGCGACGGAAGATGATGAAGAAAATGGCAGAAACAGCCAAAGATCTGCCAAGTGACTATAGTGAGAATGTGGAAGAAGAAAGTGGCGGTGCAGCTTCTGTTCCTGTTCCTATGCCAGATTTGGCCTTGCCTGCTTCTTTTGATTCTGATAACCCTACACACCGGTATCGTTATCTTGATTCATCAAACCAGTGGCTTGTGAGACCTGTTCTTGAAACTCATGGTTGGGATCATGATGTGGGTTATGAAGGGTTAAATGTAGAAAGACTGTTTGTTGTCAGGGATAAGATACCTTTATCGTTCACTGGTCAGGTTACTAAGGATAAAAAGGATGCTAATGTTCAGATGGAAATAACCAGTTCAGTTAAGCATGGTGAAGGCAAAGCAACTACATTAGGTTTTGATATGCAGACTGTTGGGAAGGACTTAGCTTATACATTACGCAGTGAAACAAGATTTACTAATTTTAGAAGAAATAACGCAACTGCTGGTCTCTCATTTACTCTTCTCGGTGATGCCTTATCAGCTGGAATGAAGATTGAAGACAAATTGGTTGCTAATAAGCGATTCAAGCTGGTTATTAGTGGTGGTGCAATGGCAGGGCGTGGCGACATTGCTTATGGTGGCAGTTTGGAGGCTCAATTGAGAGATAAAGATTATCCTCTTGGGCGTTTCTTATCCACGCTTGGGATTTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGTTGCAATGTGCAATCCCAGATCCCAGTTGGACGATTTACAAACCTCGTTGCCCGGGCAAATTTGAACAACCGAGGAGCAGGACAAATAAGCATTCGATTAAATAGTTCAGAACAACTTCAAATTGCTTTGATTGGTCTCATCCCTCTCCTAAAGAAGCTAGTTGGTTATCCTCAACAATTGCAATTTGGTCAATAG 3501 0.4324 MLKDLEVDEVYEEAMEPEEQLHDRGSKLYPGDCVVDKHEDTDTGSALTSALVDENPDAAQEPGDQEDATGVDTESGKLGETDLTATLDLERDGQGIDSVHLNGVDSGGPVDGEFCDESHGTRDDNVKSNDWSDGKEESDLITDGEMLAKENGAMVDGNSELMNDRTEIDDSEFMTPRENGGTNMETGSIDKVDYVADESNAESESECNEVITNQGSVATNLKDSVSDPELKHDKIEVKLNASSEPSSEIQDDTCPEVLDNLAHMNVEHHGEVNSEMKDDDSLGTNISHEDRNGEEMGVCGIQSTESRDYGNEDAQAGSLLENSSTEETQPVQASAADPKEANNKDYQSLIPDEQHRHSDKSSVVEEPEKKQGKNIQEKETTQLTREQNVQPPAGISSSSEKSAGAGSPPVHPAGLGRAAPLLEPASRVVQQPRANGTVSNAQSQQMEDSSSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFHMGTKKVQDVVGTVQGIRVRVIDTPGLLPSWSDQRSNEKILHSVKHFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSLVVQKAIRQAAGDVRLMNPVSLVENHTACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYIARARAPPLPFLLSTLLQSRPQLKLPEEQFGDEDGLDDDLDESSESDDETELDDLPPFKPLTKAQVEKLSKAQKKAYFDELEYREKLLMKKQLKEEKKRRKMMKKMAETAKDLPSDYSENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVRDKIPLSFTGQVTKDKKDANVQMEITSSVKHGEGKATTLGFDMQTVGKDLAYTLRSETRFTNFRRNNATAGLSFTLLGDALSAGMKIEDKLVANKRFKLVISGGAMAGRGDIAYGGSLEAQLRDKDYPLGRFLSTLGISVMDWHGDLAVGCNVQSQIPVGRFTNLVARANLNNRGAGQISIRLNSSEQLQIALIGLIPLLKKLVGYPQQLQFGQ* 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0415 1166 MobiDBLite consensus disorder prediction 381 404 - -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 266 295 - -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 433 459 - -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 788 822 - -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 304 336 - -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 166 189 - -
Apr5g0415 1166 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 331 1161 - -
Apr5g0415 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 528 668 IPR027417 -
Apr5g0415 1166 Pfam Translocase of chloroplast 159/132, membrane anchor domain 893 1156 IPR024283 -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 35 146 - -
Apr5g0415 1166 CDD Toc34_like 507 752 - -
Apr5g0415 1166 Pfam AIG1 family 535 668 IPR006703 GO:0005525
Apr5g0415 1166 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 331 1161 IPR045058 -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 433 450 - -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 869 895 - -
Apr5g0415 1166 Gene3D - 504 752 IPR027417 -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 349 380 - -
Apr5g0415 1166 Coils Coil 855 875 - -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 266 417 - -
Apr5g0415 1166 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 412 1157 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Apr5g0415 1166 MobiDBLite consensus disorder prediction 115 144 - -
Apr5g0415 1166 MobiDBLite consensus disorder prediction 793 814 - -
Apr5g0415 1166 ProSiteProfiles AIG1-type G domain profile. 532 761 IPR006703 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0415 Apr-Chr5 4050931 4055360 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0415 - - gmx:100810931 1776.53