Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0401 ATGGGTAGTAGCGGCGAGGATCCCAACTACAAACCCGATTCTCTATACGAGTCTGCAGCAACACACCCCTTTCTAACGAAACCCCAATTCCCATCTTCTTCTTCGTCTCCTCCAATCGAAGAAGATGGTTCCCAAGAATCGGAGTCAAACCAGCAATACCTTCACATCACATACAATCACGGGCCTCGCTCCTTCAAGGACCTTCCTTTGCTCATCCTCTTTCTCATCTTCATCCTCTCCACCTTCGCTTTCGGCATCTTCGCAATCTTCAACAGAAACACTAACTACTCCTCTCTCTCATCCTTCACCTACGACCCCAACACCACCTCTTGCATCAACCCTTCTGCCCTTTCCACGTCATCATTCACCATCGATTCCTCTTCGCATTTTGTGAAGGGTTTGACATGGACCCTCGTCATCACCTTCATTCTCAGCATCCCCATGTGTTGGGCTCTGCTTCTCTTACTCAAGCATTATACCAAACACATTGTCTACGCCTCCCTTCCCTTCTTCATCGCCATACCCATCTTCCTCAACGTCTACTGGTTCGTCGCCTGCACCGTAAACGCTTCGTGTAGCAACGCGTTCCCACTCGCCTACCGGATTCTGGTGATGGTGTTCGTGTTCTTGGTGATAGGGGTGATCGTGTGGATCTTGGTGGTGAATTGGCATCGCGTAGAGCTCACGGTGAGCATAATTGGGGTGGCTTCCGACGCGCTCTCGTGGAACCTGGGGTTGTTTGGGGTGCTGCCATGTTTGACCGTTGGGTTGGTGGTTTATTACGTGCCAATAGTGGTTTTCATGGTATTTTCGAGGTTTAATGGGAAGATTGTGGCAAAGAATTTGAAGGGTAAATATGAATATGGTTGTGTTTGGAAGGAGGACTCGTGGGTACCCGCTTATTTTGCATTGGCAATTCTCACCATGCTTTGGTCTGCAGCAGCCATGCTTGAAGCACAAGTTTATGTCATCAGTGGGACTATAGCCAATTGGTATTTCTCCAAGGACTATCAAACTCCCCAGCGGAGTATTAGAACTTCTCTCAGAAATGCTTTTGGTCCTTCTTCTGGCACGATATGTTTGTCAGGATTGCTTATCTTTGTTGTTCGAGTGGTGCGTTCTGCGGTTGATAGTGCTAGACAAGAGGATGCTCCTGGGATAGTTAACCTTGTATTGCGGTGCTGTGTAAATGCTTTATTGACAGCAGTTGACTTTCTTAACAAGTTTACCATAAACTTTGCTGCTATAACTGGTGAAGCCTACTGCTCATCTGCAAGGATGACATATGAACTTCTAAGACGTAATCTACTCTCTGCTGTTTTTGTGGAGACCATCTCATCCCGCCTCCTGGCTGGAATTGTCTTTGTCCTCTCTGCAATATACACAATTTTGGCCTGTGTTATCTTAAAGGCTGGTACCAATCTTGGAGCTGATTCATATTTTGTAGCTGCCATGGCATGGGTGCTTCTCATAGTAGTGCTGGGTTACCTGGTGCATGTGCTAGACAATGTCATTGACACAGTCTATGTCTGCTATGCGATAGACAGGGATAGAGGAGAGGTTTGTAAACAAGACGTCCATGAGGTGTACGTTCACCTACCCATTAGTAGAAGTCTCAGACAACCTGTTATTACAAGAACTCTAGGTGTGTAA 1653 0.4676 MGSSGEDPNYKPDSLYESAATHPFLTKPQFPSSSSSPPIEEDGSQESESNQQYLHITYNHGPRSFKDLPLLILFLIFILSTFAFGIFAIFNRNTNYSSLSSFTYDPNTTSCINPSALSTSSFTIDSSSHFVKGLTWTLVITFILSIPMCWALLLLLKHYTKHIVYASLPFFIAIPIFLNVYWFVACTVNASCSNAFPLAYRILVMVFVFLVIGVIVWILVVNWHRVELTVSIIGVASDALSWNLGLFGVLPCLTVGLVVYYVPIVVFMVFSRFNGKIVAKNLKGKYEYGCVWKEDSWVPAYFALAILTMLWSAAAMLEAQVYVISGTIANWYFSKDYQTPQRSIRTSLRNAFGPSSGTICLSGLLIFVVRVVRSAVDSARQEDAPGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLAGIVFVLSAIYTILACVILKAGTNLGADSYFVAAMAWVLLIVVLGYLVHVLDNVIDTVYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQPVITRTLGV* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0401 550 Pfam Plasma-membrane choline transporter 207 517 IPR007603 GO:0022857|GO:0055085
Apr5g0401 550 PANTHER CTL-LIKE PROTEIN DDB_G0288717 53 531 - -
Apr5g0401 550 MobiDBLite consensus disorder prediction 25 48 - -
Apr5g0401 550 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 53 531 IPR007603 GO:0022857|GO:0055085
Apr5g0401 550 MobiDBLite consensus disorder prediction 24 48 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0401 - - gmx:100810591 839.721