Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0400 ATGAGTAATGCTACTACTGGGATGTGGGTGACGGATGAGTGCAAGAACTCGTTCATGGAGATGAAGTGGAAGAAGGTGCACAGATACATAGTGTTCAAGATAGATGAAAGGTCTAGGCTTGTCACCGTCGATAAGGTGGGTGGTCCCGGCGAGAGTTATGATGATCTTGCTGCTTCCTTGCCGAACGATGATTGTAGATATGCCGTGTTCGACTTCGATTTTGTCACCGTTGATAACTGTCGCAAGAGCAAGATCTTCTTCATTGCATGGGCTCCAACAGCATCAAGGATAAGAGCAAAGATGCTATACGCAACATCGAAGGATGGGCTGAGAAGAGCTCTTGATGGAATCCACTACGAAGTTCAGGCCACCGATCCAACTGAGATGGGATTCGATGTAATTAAAGATAGAGCCAAATAG 420 0.4619 MSNATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDERSRLVTVDKVGGPGESYDDLAASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRALDGIHYEVQATDPTEMGFDVIKDRAK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0400 139 ProSiteProfiles ADF-H domain profile. 7 139 IPR002108 GO:0003779
Apr5g0400 139 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 3 139 - -
Apr5g0400 139 Pfam Cofilin/tropomyosin-type actin-binding protein 14 136 IPR002108 GO:0003779
Apr5g0400 139 Gene3D Severin 1 139 IPR029006 -
Apr5g0400 139 CDD ADF_cofilin_like 6 138 IPR017904 GO:0015629|GO:0030042
Apr5g0400 139 PANTHER COFILIN-RELATED 3 139 IPR017904 GO:0015629|GO:0030042
Apr5g0400 139 SMART adf_2 12 139 IPR002108 GO:0003779
Apr5g0400 139 SUPERFAMILY Actin depolymerizing proteins 3 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0400 Apr-Chr5 3911924 3913690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0400 K05765 - pvy:116129213 272.707