Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0398 ATGTCTCAACATTCTTCGTTCTATCCACGAGTCGATTTCACAAACCCAGAAGCCAATTCTCCCTTCTCTCAGTCCTCTTCATCTTCTTCTTCCATGTACCCCTCAATCGATACCAACAACGTTGCTGTTGCCGAGGAAGACTCAAATACGACACAACCAATGGAACATGTTCTTGTCACTGTCCCGGGAGCGATTCTGCACCTCATAGAAAAGGACTCCAGCGTCCATCTCGCTTCTGGGGACCTCACCATAGCGAGCCTCAGGGAAGGGGAAAAGGTGGTGGCAGTTCTGGCGCGCATCGGAGACCAAATTCAGTGGCCGTTGGCAAAAGACGTGTCGGCTGTGAAGCTGGACGAGTCTCACTACTTCTTCACGCTTAAGGTTCCGCAGAAGCACGGGGAGAATGAGTTGGAGGTGTTGAATTATGGGTTGACGGTGGCGGCGAAAGGGCAAGAGGGGGTGTTGAAGGAACTGGATGAAGTTCTGGAGAAGTATAGCTTTGTATCGGAGGAGAGAGTGGAGGGTGTGCGTGGGTGGGAGGTGTTGGATGGGTCTGTGTCCAAGGAAACATCGCCGGAGGAGTTGAAGTCGGAGAAGAAGAGGGAAGTGGTGGAGGAGCGTTCTGCGGCGTATTGGACTACGTTGGCACCAAACGTTGAAGATTACAGTGGTAACTTTGCAAGGTGGATTGCCTCAGGGTCAGGGCAAGTGGTTAGGGGGATTTTGTGGTGTGGGGACGTTACTGTGGATAGGTTGAAATGGGGTAATGATTTCTTGAAGAAGAGGTTGCAACCTGGTTCCCAATCCCATATTAGTCCACAAGCCTTGGAGAGGATGAAAAGGGTTAAGAAGTTGACGAAGATGTCAGAGAAAGTGGCCACCGGCGTTCTCTCGGGGGTTGTTAAGGTGTCTGGATTCTTCACAAGTTCTGTGGTGAACTCCAAAGCGGGCAAGAAATTCTTTAGCCTTCTTCCAGGAGAAATCGTCCTTGCTACCATGGATGGATTCAATAAGGTCTGTGATGCTGCGGAAGTAGCTGGAAGGAATGTCATGTCCACTTCCTCAGTTGTGACCACTGGACTCGTTTCACATAAATATGGAGAGCAAGCAGCTCAGGTAACAAATGAAGGCTTAGATGCTGCGGGGCATGCGATTGGAACAGCTTGGGCTGTGTTCAAACTTAGGAAGGCTCTCAACCCCAAAAGCGTCATCAAACCAACAACACTAGCAAAAGCTGCTGGTGAAGTTAATTCTGCTAAATTGAAGGCTAAGAAATAA 1278 0.4961 MSQHSSFYPRVDFTNPEANSPFSQSSSSSSSMYPSIDTNNVAVAEEDSNTTQPMEHVLVTVPGAILHLIEKDSSVHLASGDLTIASLREGEKVVAVLARIGDQIQWPLAKDVSAVKLDESHYFFTLKVPQKHGENELEVLNYGLTVAAKGQEGVLKELDEVLEKYSFVSEERVEGVRGWEVLDGSVSKETSPEELKSEKKREVVEERSAAYWTTLAPNVEDYSGNFARWIASGSGQVVRGILWCGDVTVDRLKWGNDFLKKRLQPGSQSHISPQALERMKRVKKLTKMSEKVATGVLSGVVKVSGFFTSSVVNSKAGKKFFSLLPGEIVLATMDGFNKVCDAAEVAGRNVMSTSSVVTTGLVSHKYGEQAAQVTNEGLDAAGHAIGTAWAVFKLRKALNPKSVIKPTTLAKAAGEVNSAKLKAKK* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0398 425 PANTHER SPARTIN 3 424 IPR045036 -
Apr5g0398 425 Pfam Senescence domain 228 414 IPR009686 -
Apr5g0398 425 PANTHER OS06G0717100 PROTEIN 3 424 - -
Apr5g0398 425 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0398 Apr-Chr5 3890137 3892124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0398 K19366 - gmx:100802385 652.129