Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0392 ATGTGGCCAGGGATTCTTGACGAAGCAAAACATGGAGGTTTAAATGTGATCCAAACTTACGTGTTTTGGAACATTCATGAGCCTGAGAAAGGCAAGTTTATAATGGAAGGGCGGTATGATCTGGTAAAGTTCATCAAGCTCGTTCAAGAAAAAGGAATGTATGTAACCCTCAGGGTTGGGCCTTTCATCCAAGCTGAATGGAATCACGGAGGATTGCCATTTTGGTTAAGAGAGGTCCCTGGCATTATATTCCGCTCTAACAATGAACCCTTTAAGACGCATATGAAAGAATACGTATCAACTATTATAGGAAAGATGAAAGAAGAGAAGCTCTTTGCTCCCCAAGGAGGCCCCATCATCTTAGCACAGATAGAGAATGAGTACAACCATATCCAACTTGCTTATGAAGAGGACGGAATTAGTTATGTCCAATGGGCTGCAAAAATGGCAGTGGCACTGGATGCTGGAGTTCCATGGCTCATGTGCAAGCAGAAGGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCACTGCGGTGATACCTTCACAGGCCCAAACAAACCTTACAAGCCTGCCATATGGACTGAAAACTGGACTGCTCAGTACAGGGTGTTTGGAGATCCACCATCCCAAAGATCTGCAGAAGACATTGCCTTCTCAGTTGCCCGCTTCTTTTCTAAGAATGGGTCTTTGGTCAACTACTACATGTATCATGGTGGGACAAACTTTGGTAGAACAACCGGTGCCTTTACAACAACCAGATATTACGATGAAGCTCCTCTTGATGAGTTTGGTCTACGTAGAGAACCAAAATATGGTCACTTAAAGGACGTGCACAGGGCTTTGAACCTATGCAAGAAGGCCATGTTCTCGAGTCAGTCTAAAGTCAATAAAATTAGCCAATATCATGAGATTATAGTTTTTGAGAGGCCAGGAAGTAATACATGTGCTGCTTTCATCACTAACAACCACACCCAAACTCCAGCAACTATAAACTTCAGAGGTTCGGAGTATTATTTGCCACCACGCTCCATCAGCATCCTCCCTGATTGCAAGAATGTGGTCTTCAACACTCAAAATATTGTTTCACAACATAATATAAGAAACTACAAGAAGTCAAAGACAGCAAACAATCATAAGTGGGAGGTTTTTAATGAGCCCGTTCCAACTACCAAGCAAACCAAATTCGATTCAAAAGTTAAAGTTCCTGCAGAGCTTTATAGCTTGCTTAAAGACACCACAGACTATGGATGGTACACCACAAGCGTGGAATTGGGTCCAGAAGACTTGTCAAGGAAGACTGATGTATCCCCCGTTCTTCGTATAATGAGTCTTGGTCACTCATTGCTTGCTTTTGTAAATGGAGAATTCGTTGGGTCCAATCATGGTAGCCATGAGGAGAAATCTTTTGAATTCCAGAAACCTGTAAAATTCAAGGTTGGAACTAACCAGATAGCTATCTTAGCTTCCACAATGGGACTCCCCGACAGTGGAGCATACATGGAGCATAGGTTTGCTGGACCCAAGTCTATAACCATCCTTGGTCTTAACTCGGGAAAAATTGATCTCACTAGTAATGGATGGGGTGTACAGGTTGGTCTCCAAGGCGAGAAGCAAAGCATTTTCACTGAGGAAGGTGCAAAGAAAGTGGAATGGAAGGAGGTGAAGGGATCTGGAACAACTCTCTCCTGGTACAAGACAAAATTTGAAACCCCAGAGGGAAGGGATCCTGTTGCCATCAGGATGACTGGTATGGGGAAGGGAATGATTTGGATCAATGGTGAAAGCATTGGTCGTCACTGGATGAGCTACCTCTCTCCTCTTGGAAAGCCTACTCAGTCAGAGTACCACATCCCAAGAAGTTTCCTCAATCCAAAAGACAACTTACTTGTTATATTTGAGGAAGAGGTAGCAAATCCTGAAAACGTTGTTATCTTAAATGTGGACAGAGATACAGTATGCAGTTTCATTACAGAGAATTATGCACCAAATCTGAAGTCATGGGCAAGTAAGAGCGGCAAATTCCATGCTGTTGTGGATAATCTGAAGCCAGCAGCTTCAATCAAGTGTCCAAACGACAAAACCATTTTGGCTGTAGAGTTTGCAAGCTTTGGTGATCCTTCGGGTTTCTGTGGAAGCTTTTCTGTGGGCAAATGTAATGCACCTTCCGCTACGAAGATTGTTGAGCAGCATTGTCTACGAAAAAATGCTTGTTCAGTTCCAGTGGACAAGGCACTCTTTAACATGGGTCAAGATGAATGCCCAAGTGTGATGAAGGCACTTGCAATCCAAGTGAAGTGTGGCTATTAG 2316 0.4335 MWPGILDEAKHGGLNVIQTYVFWNIHEPEKGKFIMEGRYDLVKFIKLVQEKGMYVTLRVGPFIQAEWNHGGLPFWLREVPGIIFRSNNEPFKTHMKEYVSTIIGKMKEEKLFAPQGGPIILAQIENEYNHIQLAYEEDGISYVQWAAKMAVALDAGVPWLMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPAIWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTTGAFTTTRYYDEAPLDEFGLRREPKYGHLKDVHRALNLCKKAMFSSQSKVNKISQYHEIIVFERPGSNTCAAFITNNHTQTPATINFRGSEYYLPPRSISILPDCKNVVFNTQNIVSQHNIRNYKKSKTANNHKWEVFNEPVPTTKQTKFDSKVKVPAELYSLLKDTTDYGWYTTSVELGPEDLSRKTDVSPVLRIMSLGHSLLAFVNGEFVGSNHGSHEEKSFEFQKPVKFKVGTNQIAILASTMGLPDSGAYMEHRFAGPKSITILGLNSGKIDLTSNGWGVQVGLQGEKQSIFTEEGAKKVEWKEVKGSGTTLSWYKTKFETPEGRDPVAIRMTGMGKGMIWINGESIGRHWMSYLSPLGKPTQSEYHIPRSFLNPKDNLLVIFEEEVANPENVVILNVDRDTVCSFITENYAPNLKSWASKSGKFHAVVDNLKPAASIKCPNDKTILAVEFASFGDPSGFCGSFSVGKCNAPSATKIVEQHCLRKNACSVPVDKALFNMGQDECPSVMKALAIQVKCGY* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0392 771 Gene3D - 680 771 IPR043159 -
Apr5g0392 771 Gene3D Glycosidases 1 287 - -
Apr5g0392 771 SUPERFAMILY (Trans)glycosidases 1 287 IPR017853 -
Apr5g0392 771 Pfam Glycosyl hydrolases family 35 1 283 IPR031330 -
Apr5g0392 771 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 1 766 - -
Apr5g0392 771 Pfam Beta-galactosidase jelly roll domain 552 634 IPR025300 -
Apr5g0392 771 Pfam Beta-galactosidase jelly roll domain 407 495 IPR025300 -
Apr5g0392 771 SUPERFAMILY Galactose-binding domain-like 528 676 IPR008979 -
Apr5g0392 771 ProSiteProfiles SUEL-type lectin domain profile. 682 770 IPR000922 GO:0030246
Apr5g0392 771 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 116 128 IPR019801 GO:0004553|GO:0005975
Apr5g0392 771 SUPERFAMILY Galactose-binding domain-like 347 509 IPR008979 -
Apr5g0392 771 Pfam Beta-sandwich domain in beta galactosidase 293 363 IPR041392 -
Apr5g0392 771 PRINTS Glycosyl hydrolase family 35 signature 2 20 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 PRINTS Glycosyl hydrolase family 35 signature 57 76 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 PRINTS Glycosyl hydrolase family 35 signature 114 129 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 PRINTS Glycosyl hydrolase family 35 signature 195 210 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 PRINTS Glycosyl hydrolase family 35 signature 232 247 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 PRINTS Glycosyl hydrolase family 35 signature 251 267 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 PRINTS Glycosyl hydrolase family 35 signature 562 576 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 PRINTS Glycosyl hydrolase family 35 signature 589 605 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 Gene3D - 534 658 - -
Apr5g0392 771 PANTHER BETA-GALACTOSIDASE RELATED 1 766 IPR001944 GO:0004553|GO:0005975
Apr5g0392 771 Pfam Galactose binding lectin domain 690 769 IPR000922 GO:0030246
Apr5g0392 771 Gene3D - 350 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0392 Apr-Chr5 3774362 3779428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0392 1 770 Glycoside Hydrolase AT2G16730 60.982 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0392 - - aprc:113864946 1586.24