Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0386 ATGGGCGCTCTAGATCACATCTCAGAGCTCTTTGATTGCTCCTACACCAGCTCCAAGCTAAAGAAGAAGCGCAAGCAATTTCAGACGGTGGAGGTGAAAGTGAAGATGGACTGCGAAGGGTGTGAGAGGAAGGTGAAGAAATCGGTGGAGGGGATGAAAGGGGTGACGCAACTGGAGGTGGATCGAAAGGCCAGCAAGGTCACTGTTTCAGGCTACGTTGAACCCTCCAAGGTGGTGGCTCGCATCGCTCACCGCACCGGCAAGAGGGCAGAGTTGTGGCCTTACGTGCCATACGACGTCGTTGCTCACCCTTACGCGCCCGGTGTGTATGACAAGAAAGCACCTACTGGTTATGTTCGAAACGCCGATTGGGACCCTCAGGTGTCCAACCTCGCACGTGCCAGCTCCACCGAGGTCAAGTACACCACCGCTTTCAGCGACGAAAACCCCGCCGCATGTGCCGTCATGTGA 471 0.5584 MGALDHISELFDCSYTSSKLKKKRKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTQLEVDRKASKVTVSGYVEPSKVVARIAHRTGKRAELWPYVPYDVVAHPYAPGVYDKKAPTGYVRNADWDPQVSNLARASSTEVKYTTAFSDENPAACAVM* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0386 156 CDD HMA 31 91 IPR006121 GO:0046872
Apr5g0386 156 ProSiteProfiles Heavy-metal-associated domain profile. 36 92 IPR006121 GO:0046872
Apr5g0386 156 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 156 - -
Apr5g0386 156 Gene3D - 13 94 - -
Apr5g0386 156 Pfam Heavy-metal-associated domain 32 87 IPR006121 GO:0046872
Apr5g0386 156 SUPERFAMILY HMA, heavy metal-associated domain 27 94 IPR036163 GO:0046872
Apr5g0386 156 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 156 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0386 Apr-Chr5 3721651 3723354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0386 - K10752 gmx:547973 298.13