Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0382 ATGGAAGTTAACCTCTCTTTCAACCACCATCGCTCCCTCACTCTAACCTCACGCTCTCCCACTTCCTTCTTCACTCTCCGCACACACTTTCTCGGTTCCGTCCACACTCTCAGGCCTCCACCACCACCCTCTGCATCTGCACCATCCCTTCGTACTCGAAACAAATGCAACAAGTTAGGCTTTCTTCGCTTCCACTCTCCGCGCTTCGTCTTCAAGGCCTCTCTCCATTCTCCCTCCGTCATCGTCGTCGTCATCGTCGTTACTTTATCTGCTGTTTCTTTGCTCCACTTCACTCTCAACAGGAGAAAGAAGGCTCTTAACCAGACACAGGGACATGCAAAATTTGCATTATCGCCGCAAGGAAGTAATGTTGGAAACCAGGTCATTGACAGCCAGATTCTTGGTTTTCCAGAATTTCAAAGGGAAAACCCAATAAATGAAATTGGGAAGTTAAAGGATCACAATGGAGAAGATAACCACGCCTTTGAGGACAAAGAGATGCACCTTCCATTTTTGAAATCCTCAATGATACAAGAAGTTTCCCTCACAACTGAGACAGCAGAATCAACTTCTTCTGTTCTTGAGTCTAGTGTCAATAATAACAGTTCCAAGGTATTGGGCGACCCCCATTTATCTGTGGCTTTACCATCAAGTACATTACAACCACTAGATTTTGCTGAGGAAATGGTTAAACAAGTGGAAGAAAATCAACATAACCTTGGCTCTGATCCTGAGTTGCCTTTGAATATGGTCAAACCTCAGTATACTGCTTCTTCTGTTTGTGTAAACAATGCCCTAGCAACAATTGATGAGCATACTGAAGAAAACATTAAACTTGGTGCCATCAACAGCAATGTCTTTGTCAGTGAATCAGTTAGGGAATCGCTGTACATGTTTTATGAGGATAACAAGTCTGCAACCAAATCCATGACACCACTGAGTAGTTTAAATTCTTTATCTCCTCGTGCTTCTTTTGTGAATAAAAAAGGATTGCCCTCAGCAATAGGAAATGCTACACTAAAAGGATCAGGATTATCTACAGATGTTTCTCTTAAAAGTACAGTTAAAATCTCCAGTCATAAAGAAGGCTACCCCCCACAACATGTGAATAAACACTTGAGGAAAGGCAGCAGCTCTTCTAGAGACAGGGAAGGGAACTATATGGATCATAATATTAACAAAGTTTTCTCTCAGAATGCCCACTCAATCAAGGTGCATTTTGATCAGAAAAATGATCAAATCAGGGTGCATGATGGTCAGAATATTGATCCTTCAGAGCATCTAAGCAAATATAATAATCTGCTAAAAGCTGGGAGGTTACATGAATGTGTGGAATTGCTTAAAGATATGGAAATGAAGGGTTTATTAGATATGAATAAGGTTTATCATGTCAAGTTTTTTAACATCTGCAAGAAACGAAAGGCTGTCAAAGAAGCTTTTGATTACATTAGGCTTATTTCAAATCCAACGCTGAGTACATTTAATATGCTTATGTCGGTTTGTGCAAGATCCCAAGATTCAGAAAGAGCTTTCCAAGTTTTGCAGCTTCTTAAGGATGCTCGACTAGAACCTGATTGCAAACTTTATACCACTCTGATATCAACTTGTGCAAAGAGTGGGAAAGTTGACCTAATGTTTGAAGTGTTTCACACAATGGTAAATTCTGGAGTGGAGCCTAACGTTCATACCTATGGGGCACTTATAGATGGTTGTGCTAGAGCCGGGCAAGTAGCTAAAGCATTTGGTGCTTATGGGATAATGAGGTCAAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCTCAATCAGGAGCAGTGGATCGTGCTTTTGATGTGTTAGCAGAAATGGCTGCTGAAACACATCCCATCAACCCAGATCATGTGACTATTGGTGCATTGTTAAAGGCATGTGCAAATGCTGGCCAGGTTGAACGAGCACGAGAAGTGTACAAGATGATACAAAAATATAGCATAAAGGGGTCTCCAGAAGTTTACACTATTGCCATTAATTCTTGCAGTCAAACTGGAGATTGGGAATTTGCTTGCAGTGTATACAATGACATGACCCAGAAAGGGATTCTCCCGGATGAGATATTTCTGAGTGCACTAATAGATGTTGCTGGACATGCTAAAAAGCTGGATGCTGCCTTTGATGTCCTACAAGAAGCCCGTGAAGGAGGAATGTGTATTGGAATAATGTCATATAGCTCATTGATGGGTGCCTGTAGCAATGCAAGAAATTGGCCGAAAGCACTGGAGCTATATGAATATCTGAAATCTCTTAAATTGACGATAACTGTTTCAACAATTAATGCTTTGCTCACTGCACTTTGTGATGGAGATCAATTTCATAAGGCTTTGGAGATTTTATTTGAAATGAAAGGATTAGGATTGTGCCCAAACAGTATCACATTCTCAATACTAATAGTGGCAAGTGAGAAGAAGGATGATATGGAGGCGGCTCAAATGCTCCTTTCTCAAGCCAAAAAAGATGGTGTAGCCACAAATCTCATCATGTGTCGATGTATAATTGGATTGTGCCTCCGGAGATTTGAGAGGGCTTTCTTTGTTGGTGAGCCTGTTTTATCTTTTGACCCAGGACGACCGCAAGTGAATAACAAATGGACATCACTGGCCTTAATGGTGTACCGTGAAACAATTGAAGCTGGTGAAAAGCCTACAAGTGAAATATTGTCTCAAATTCTGGGATGTCTGAAACTCCCGTATGATACATCTGTGAAAAATAGTCTTGTTGAGAATCTAGGGGTATGTGCAGAAACTTCAAGAAGTTCAAACCTCTGTTCATTAGTGGATGGATTTGGTGAATATGATCCTCGTGCTTTTTCAATACTTGAGGAAGCTGCTTCACATGGAGTTGTTCCATCCGTATCATTTAAAGTTTGTCCTATTGTTATTGATTCTAAAGAATTGCATGCTTCTACTGCTGAGGCATACCTCTTAACTGTTTTAAAAGGTCTCAAGCATCGACTAGCAGCAGGTGCAAGGTTACCCAATATAATCGTTTTATTTCCCGTGGAGAAAACAGAAATTATGTCTCCTAAGGGGAAAAAGATTGTTATTAACTTTGCAGGAAGAGTTGGCCAAGCAATTGCAGCGTTATTGAGGAGGCTTCAGATTCCTTACCAGGGTAATGAATCAAATGGGAAGCTTAGAATTAATGGTCTAGCTCTGAAAAAATGGTTTCGGCCAAAACTTGCATCTCCATTCAGCGGAAAACCAGGTGACTGGAGCTCATCCCTATCACGGCTGGGCAAAAGTATTAGTCATCAGCAACGAAACATTCGAACTGGCAATCTCTCTTTGGACTAA 3348 0.4095 MEVNLSFNHHRSLTLTSRSPTSFFTLRTHFLGSVHTLRPPPPPSASAPSLRTRNKCNKLGFLRFHSPRFVFKASLHSPSVIVVVIVVTLSAVSLLHFTLNRRKKALNQTQGHAKFALSPQGSNVGNQVIDSQILGFPEFQRENPINEIGKLKDHNGEDNHAFEDKEMHLPFLKSSMIQEVSLTTETAESTSSVLESSVNNNSSKVLGDPHLSVALPSSTLQPLDFAEEMVKQVEENQHNLGSDPELPLNMVKPQYTASSVCVNNALATIDEHTEENIKLGAINSNVFVSESVRESLYMFYEDNKSATKSMTPLSSLNSLSPRASFVNKKGLPSAIGNATLKGSGLSTDVSLKSTVKISSHKEGYPPQHVNKHLRKGSSSSRDREGNYMDHNINKVFSQNAHSIKVHFDQKNDQIRVHDGQNIDPSEHLSKYNNLLKAGRLHECVELLKDMEMKGLLDMNKVYHVKFFNICKKRKAVKEAFDYIRLISNPTLSTFNMLMSVCARSQDSERAFQVLQLLKDARLEPDCKLYTTLISTCAKSGKVDLMFEVFHTMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAETHPINPDHVTIGALLKACANAGQVERAREVYKMIQKYSIKGSPEVYTIAINSCSQTGDWEFACSVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEAREGGMCIGIMSYSSLMGACSNARNWPKALELYEYLKSLKLTITVSTINALLTALCDGDQFHKALEILFEMKGLGLCPNSITFSILIVASEKKDDMEAAQMLLSQAKKDGVATNLIMCRCIIGLCLRRFERAFFVGEPVLSFDPGRPQVNNKWTSLALMVYRETIEAGEKPTSEILSQILGCLKLPYDTSVKNSLVENLGVCAETSRSSNLCSLVDGFGEYDPRAFSILEEAASHGVVPSVSFKVCPIVIDSKELHASTAEAYLLTVLKGLKHRLAAGARLPNIIVLFPVEKTEIMSPKGKKIVINFAGRVGQAIAALLRRLQIPYQGNESNGKLRINGLALKKWFRPKLASPFSGKPGDWSSSLSRLGKSISHQQRNIRTGNLSLD* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0382 1115 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 595 629 IPR002885 -
Apr5g0382 1115 Coils Coil 817 837 - -
Apr5g0382 1115 MobiDBLite consensus disorder prediction 358 387 - -
Apr5g0382 1115 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 490 524 IPR002885 -
Apr5g0382 1115 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 772 806 IPR002885 -
Apr5g0382 1115 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 525 559 IPR002885 -
Apr5g0382 1115 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 73 1115 - -
Apr5g0382 1115 Gene3D Tetratricopeptide repeat domain 455 570 IPR011990 GO:0005515
Apr5g0382 1115 Pfam Pentacotripeptide-repeat region of PRORP 640 784 IPR033443 -
Apr5g0382 1115 Pfam Pentacotripeptide-repeat region of PRORP 492 626 IPR033443 -
Apr5g0382 1115 Gene3D Tetratricopeptide repeat domain 764 840 IPR011990 GO:0005515
Apr5g0382 1115 Gene3D Tetratricopeptide repeat domain 571 737 IPR011990 GO:0005515
Apr5g0382 1115 TIGRFAM PPR: pentatricopeptide repeat domain 562 595 IPR002885 -
Apr5g0382 1115 TIGRFAM PPR: pentatricopeptide repeat domain 670 703 IPR002885 -
Apr5g0382 1115 TIGRFAM PPR: pentatricopeptide repeat domain 493 526 IPR002885 -
Apr5g0382 1115 TIGRFAM PPR: pentatricopeptide repeat domain 634 665 IPR002885 -
Apr5g0382 1115 TIGRFAM PPR: pentatricopeptide repeat domain 775 807 IPR002885 -
Apr5g0382 1115 TIGRFAM PPR: pentatricopeptide repeat domain 528 561 IPR002885 -
Apr5g0382 1115 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 632 666 IPR002885 -
Apr5g0382 1115 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 667 701 IPR002885 -
Apr5g0382 1115 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 560 594 IPR002885 -
Apr5g0382 1115 Pfam Pentatricopeptide repeat domain 795 853 IPR002885 -
Apr5g0382 1115 Pfam PPR repeat 434 455 IPR002885 -
Apr5g0382 1115 MobiDBLite consensus disorder prediction 365 387 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0382 423 842 Glycosyltransferase AT1G05670 25.412 1.14e-31 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0382 - - gmx:100814164 1691.01