Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0370 ATGCCCAACAGCTCATCTTCGAAAAAGCACGGTCAAGATCAACCTGAATTAAGTGGTCCTACCCCAAAATCCCAGCGAACCAAAATGGGCAAATCCGAAGACAACGATAAGAAGAAACTCAAAGACGTGGAAATAAGCGTTCCAATAGTGTACGGAAACATAGCATTTTGGCTTGGCAAAAAAGCTAGCGAGTATCAGTCACATAAGTGGACAGTATATGTTCGCGGAGCAACCAATGAGGATCTTGGGACGATAATAAAGCGTGCTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCCACACGTGTTGTGGAGTCACCACCGTTTGAATTGTCAGAAGCAGGATGGGGGGAATTTGAAGTTGCCATCACACTTTATTTCCACAGTGATGTTTGTGATAAGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAGAACAGTTCCATGTCCACAAAGAAGCCTGTCGTTGTGGAGTTTTATGATGAGATAGTTTTCCCTGATCCTTCTGAGGCATTTTTAGCTCGGGTGCAAAGTCATCCAGCTGTGAACTTGCCAAGATTACCTGCTGGGCTTACCTTGCCTCCTCCCATACCTGTTGAGGATGCAAGTAAAAGGAGGAAAGGTGATACCAAAGATCATTCCTTAAATCAGTGGTTCACGAATTTCTCAGAAGCAGATGAGCTCTTACAGCTTGCAGCAGCTCGGCAGCAGGTTCAAGCTCACATTGCTAAACTCAGACGACAGATAAACTTGATAGATGGACAGCATCAGCAGTTAAAATCTTCTGACCAGTAA 807 0.4349 MPNSSSSKKHGQDQPELSGPTPKSQRTKMGKSEDNDKKKLKDVEISVPIVYGNIAFWLGKKASEYQSHKWTVYVRGATNEDLGTIIKRAVFQLHSSFNNPTRVVESPPFELSEAGWGEFEVAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVEFYDEIVFPDPSEAFLARVQSHPAVNLPRLPAGLTLPPPIPVEDASKRRKGDTKDHSLNQWFTNFSEADELLQLAAARQQVQAHIAKLRRQINLIDGQHQQLKSSDQ* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0370 268 PANTHER YEATS DOMAIN 16 266 IPR005033 GO:0006355
Apr5g0370 268 Coils Coil 232 252 - -
Apr5g0370 268 Gene3D YEATS domain 40 192 IPR038704 -
Apr5g0370 268 MobiDBLite consensus disorder prediction 1 26 - -
Apr5g0370 268 MobiDBLite consensus disorder prediction 1 37 - -
Apr5g0370 268 CDD YEATS_TFIID14_like 45 176 - -
Apr5g0370 268 ProSiteProfiles YEATS domain profile. 39 183 IPR005033 GO:0006355
Apr5g0370 268 Pfam YEATS family 67 146 IPR005033 GO:0006355
Apr5g0370 268 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 16 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0370 Apr-Chr5 3485156 3488584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0370 K11341 - gmx:100790602 509.99