Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0360 ATGGCCGAGGACGAAACAGCAACTCACAAAACTTTGGAGGTTCAGGATTTCCATCCTCAAAAGAAGACCGCAAGAAACAAGTTTGCTCTCGCTTGTGCCATTTTGGCATCCATGACTTCCATTCTACTTGGTTACGATATTGGAGTGATGAGTGGAGCGGCTCTCTATATAAAAAGAGATCTCAAGCTCTCCGACGTGCAAATCGAAATCCTTAACGGCATCATAAACCTCTACTCTCCGATAGGGTCATATATCGCCGGCGGAACCTCCGATTGGATTGGCCGCCGTTACACAATCGTTCTCGCCGGCGTAATCTTCTTCGCCGGAGCCATTCTCATGGGATTTTCCCCCAACTATGCCTTTCTCATGTTTGGCCGCTTCGTCGCCGGCATTGGCATCGGCTTCGCCTTCCTCATTGCTCCGGTCTACACCTCCGAAATTTCCCCAACTTCCTCTCGCGGTTACCTCACTTCCTTTCCAGAGGTTTTTCTGAATGGAGGGATTTTAATTGGATACATCTCAAACTACGGGTTTTCTAAGCTTCCACTTCGCTTGGGTTGGCGACTCATGCTTGGAGTCGGAGCCATTCCTTCTATATTCCTAGCCGTGGCTGTGTTAGCCATGCCAGAGTCGCCAAGGTGGCTTGTAGCCAAGGGTCGGCTAGGGGAAGCCAAAAAAGTTCTGAACAGAATATCGGATTCGAAGGAAGAGGCTGGGCTAAGGCTAGCCGATATTAAAGAAACGGCTGGAATTCCTCAGGACTGCGACGACGACGTCGTTTCAGTAACGAAGCAGCAAGGCAAAGGCGTGTGGAAAGAACTGCTACTATATCCAACACCCGCAGTTCGTCACATCTTCATTGCGTCCCTTGGGATTCACTTCTTTGCGCAGGCCACGGGCATAGACGCTGTCGTTTTGTATAGCCCAAGAATCTTTGAGAAGGCTGGGATCAAATCCGATACGAACAAGCTTCTGGCAACCGTGGCTGTTGGGTTCGTGAAAACCGTTTCGATTTTAGTAGCGACGTTTTTGTTGGACCGGGTCGGGCGACGTGTGTTGCTGCTAAGCAGTGTTAGTGGGTTGATTTTCTCACTTGTAACCCTTGCGGTGAGTCTCACTATTGTGGACCGTTCACGGACTACGCTAACGTGGGCCATTGGGCTTAGCATTGCATCAGTATTGTCCTACGTGGGCACGTTTTCCATTGGGTCGGGGCCCATCACGTGGGTTTATAGCTCCGAGATTTTCCCGCTAAGGCTGCGCGCTCAAGGTGTGGCTATTGGAGCTGCGGTGAATAGACTCACTAGTGGGGTTATCTCAATGACTTTTCTGTCCCTCTCTAAAGCCATCACCATTGGAGGCGCCTTCTTTCTCTTCGCCGGCATTGCAGTGGCCGCGTGGATCTTTCACTACACACTGCTCCCTGAAACACGAGGCAAAACACTTGAGGAAATTGAAGGTTCGTTCGGTAATTTTCGCAGGAAATCCAACGCCGTCCAAGTTAACGGTAACCGCCAAATTCAGTCAAGGACCAATGACCAGACTTCCACAAATGTCGATTAG 1563 0.5016 MAEDETATHKTLEVQDFHPQKKTARNKFALACAILASMTSILLGYDIGVMSGAALYIKRDLKLSDVQIEILNGIINLYSPIGSYIAGGTSDWIGRRYTIVLAGVIFFAGAILMGFSPNYAFLMFGRFVAGIGIGFAFLIAPVYTSEISPTSSRGYLTSFPEVFLNGGILIGYISNYGFSKLPLRLGWRLMLGVGAIPSIFLAVAVLAMPESPRWLVAKGRLGEAKKVLNRISDSKEEAGLRLADIKETAGIPQDCDDDVVSVTKQQGKGVWKELLLYPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDTNKLLATVAVGFVKTVSILVATFLLDRVGRRVLLLSSVSGLIFSLVTLAVSLTIVDRSRTTLTWAIGLSIASVLSYVGTFSIGSGPITWVYSSEIFPLRLRAQGVAIGAAVNRLTSGVISMTFLSLSKAITIGGAFFLFAGIAVAAWIFHYTLLPETRGKTLEEIEGSFGNFRRKSNAVQVNGNRQIQSRTNDQTSTNVD* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0360 520 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr5g0360 520 PRINTS Sugar transporter signature 40 50 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0360 520 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0360 520 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0360 520 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0360 520 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0360 520 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 16 504 - -
Apr5g0360 520 Gene3D MFS general substrate transporter like domains 21 491 IPR036259 -
Apr5g0360 520 SUPERFAMILY MFS general substrate transporter 19 486 IPR036259 -
Apr5g0360 520 ProSitePatterns Sugar transport proteins signature 1. 86 103 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr5g0360 520 TIGRFAM SP: MFS transporter, sugar porter (SP) family 17 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0360 520 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 16 504 IPR045262 GO:0015144
Apr5g0360 520 CDD MFS_PLT 35 485 IPR044776 GO:0005351
Apr5g0360 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 32 478 IPR020846 GO:0022857
Apr5g0360 520 Pfam Sugar (and other) transporter 32 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0360 Apr-Chr5 3410268 3412208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0360 19 506 Organic Solute Cotransporters AT3G18830 67.143 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0360 - - gmx:100816478 811.216