Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0356 ATGGGAGCTATTGCTGGAGAAGAGCTGTTGAAATGGGAGAAGATGCAAGGAGCGAGTGGTCGTGAAGAGAAGATTCTTGTGTCAATAAGGCTGAGGCCTTTGAGTGAGAAGGAAATTGCGGCTAATGAATCAGCAGACTGGGAATGCATCAATGATACTACCATCTTGTACCGGAACACACTGCGTGAGGGTTCCACTTTTCCTAGCGCCTACACATTTGACAGAGTATTTCGTGGTGACTGTGTCACAAGGCAGGTATATGAGGAAGGAGCCAAAGAAGTTGCTCTTTCGGTTGTTGGTGGAATTAACTCAAGTATTTTTGCATATGGGCAAACAAGTAGTGGAAAGACATACACGATGATTGGAGTAACCGAATATGCTGTAGCAGATATTTTTGACTATATAAAGAGGCATGAAGAAAGAGCATTTGTATTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTAGAGACCTCCTAAGCACTGACAACACTCCACTTAGACTGCGGGATGATCCTGAGAGAGGACCCATTTTAGAGAAACTTACAGAGGAGACTCTACGGGACTGGGTGCATTTAAAAGAGCTCCTAGCCTTCAGTGAAGCTCAGAGACAGGTGGGAGAGACATACCTGAATGAAAAGAGTTCTAGATCTCACCAAATTATCAGATTGACAATGGAAAGTTCTGCCAGGGAATTCCTGGGCAAAGGAAACTCAGCCACCCTTGTAGCTAGTGTGAATTTTGTTGATTTGGCAGGGAGTGAGCGTGCATCTCAGGCATCATCAGCTGGGATGAGATTGAAAGAAGGATGTCATATAAACCGGAGTTTGCTTACTCTTGGAACAGTTATTCGTAAGCTTAGTAAGGGAAGACATGGTGGACACATAAATTACAGAGATTCCAAGTTGACACGCATACTGCAGCCTTGCTTGGGTGGCAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGAAGCCATGTTGAGCAAACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTAACCACTAAAGCACAGGTTAACGTAGTGATGTCTGATAAAGCATTGCTGAAGCATTTGCAAAAAGAGGTGGCCAGATTGGAGAGTGAGTTGAGAACTCCTGGTCCTGCTATCTCCAATTGTGATTATGCAGCATTGTTGAGAAAGAAAGATCTCCAGATAGAAAAGATGGAGAAGGAGATCAGGGAACTAACTAAGCAACGTGATCTTGCTCAATCAAGGGTTGAGGATTTGCTGCGCATGGTTGGAAAAGAGCAGATATCTGGAAATGAAGGGGAAGATATATGGGAAGATGACTGTTCGGTATCAGAGGGCTCAAGCATTTGTGGTACTCATCGTCCTGATACACGCATTAAAGAGTTCAACAATCCTCATTTTAATGATGGGGACAGTGGAAGTAATCTTGATGAAGACCCTGATGAATACTGCAAAGAAGTTCGATGTGTTGAGTTGGAGGAGTCAAGCAGAGACAATCTTGATCCATCGCTAAGTGACAACGGGGAGTTGGCTCTAGCAGGGGATGAAAATGGAACAAGCCAGGAAATATCTACAGAAGACAGTCAGATCCAAGAAAATTCAACGTATGGAGTGCTGGAGCAGAGATTGCACGATGTACAGTCAACCATTGATTCTCTTGTATGTCCTTCCCCTGATGAACAATCTCCACCGGCCACCTCAGAAAGTATGTCAAATTATAAGAATCTTAAATTAACTAGAAGCTGGAGTTGTACGGAATATCACATGACAGGTTTTCCTGAGACAGGAGGAGAAATACAGAGGACTCCAGCCAGTGGGTTTGAAAAAGGATTTCCCGGAAGGCCAGATGGTTTGCGGGGAAAGTTTCCTCCATTAAATTATGATGGTTCCACAAGATTGTTAAGGAACGGTTCTCAGTCTTCCGTTGGAAGTCCTTCTGTGGATGAGCTTAGAGTGAGCAGCATGAGAACGTCTGCTGATGAGGATATTACTAGCATCCAGACGTTTGTTGCTGGGATGAAAGAAATGGTCAAACTTGAATATGAGAAGCAGCTTGTTGACGGACAGGATCAGGATACAGAGAGAAAACCATTTAGGCTTGAGAGGAACGTGAAAGATGCGGGTGTGGATCCAATGTTGGAGGCACCTGGAACTCCTTTAGACTGGTCTCTGCAATTCAGAAGACAGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTGTGTACCATTGACCCACCGGACCTACTTCTTTCTTCTCTTCAAGGGTGATCTAACAGACTCTATTTACATGGAGGTAGAGCTTAGAAGACTAGCTTTCCTCAAAGAAACATTTTCTGATGGAAACCAGTCTGTGAAAGATAGTCAGACAATTACACTAGCTTCAAGCGTTAAAGCTCTTCGCCGAGAAAGAGGAATGCTGGTGAAGCTTATGCAGAGGAGGCTTTCCGAGAAAGAGAGAAATAGACTCTTCGAGGAGTGGGGCATTGCATTGGATTCAAAGCGGAGGAGGATGCAGCTAGCGAACCGCTTATGGAGTGAAACTGATATGAACCACGTAATGCAAAGTGCTACAATAGTTGCCAAGTTAGTCAGGTTTTGGGAGCGGGGCAAGGCCCTCAAGGAGATGTTTGGGCTTAGCTTCACACCTCAAATTACTGGTCGAAGATCTTATCCATGGATAAATAGCTGA 2706 0.4394 MGAIAGEELLKWEKMQGASGREEKILVSIRLRPLSEKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCVTRQVYEEGAKEVALSVVGGINSSIFAYGQTSSGKTYTMIGVTEYAVADIFDYIKRHEERAFVLKFSAIEIYNEIVRDLLSTDNTPLRLRDDPERGPILEKLTEETLRDWVHLKELLAFSEAQRQVGETYLNEKSSRSHQIIRLTMESSAREFLGKGNSATLVASVNFVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLSKGRHGGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALLKHLQKEVARLESELRTPGPAISNCDYAALLRKKDLQIEKMEKEIRELTKQRDLAQSRVEDLLRMVGKEQISGNEGEDIWEDDCSVSEGSSICGTHRPDTRIKEFNNPHFNDGDSGSNLDEDPDEYCKEVRCVELEESSRDNLDPSLSDNGELALAGDENGTSQEISTEDSQIQENSTYGVLEQRLHDVQSTIDSLVCPSPDEQSPPATSESMSNYKNLKLTRSWSCTEYHMTGFPETGGEIQRTPASGFEKGFPGRPDGLRGKFPPLNYDGSTRLLRNGSQSSVGSPSVDELRVSSMRTSADEDITSIQTFVAGMKEMVKLEYEKQLVDGQDQDTERKPFRLERNVKDAGVDPMLEAPGTPLDWSLQFRRQQKEIIELWQSCCVPLTHRTYFFLLFKGDLTDSIYMEVELRRLAFLKETFSDGNQSVKDSQTITLASSVKALRRERGMLVKLMQRRLSEKERNRLFEEWGIALDSKRRRMQLANRLWSETDMNHVMQSATIVAKLVRFWERGKALKEMFGLSFTPQITGRRSYPWINS* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0356 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 380 IPR027417 -
Apr5g0356 901 Coils Coil 393 427 - -
Apr5g0356 901 Pfam Domain of unknown function (DUF3490) 730 889 IPR021881 -
Apr5g0356 901 MobiDBLite consensus disorder prediction 500 537 - -
Apr5g0356 901 ProSiteProfiles Kinesin motor domain profile. 24 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0356 901 Gene3D Kinesin motor domain 16 378 IPR036961 -
Apr5g0356 901 MobiDBLite consensus disorder prediction 457 485 - -
Apr5g0356 901 PANTHER CENTROMERE PROTEIN E 6 901 - -
Apr5g0356 901 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0356 901 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0356 901 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0356 901 PRINTS Kinesin heavy chain signature 297 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0356 901 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 901 - -
Apr5g0356 901 MobiDBLite consensus disorder prediction 522 537 - -
Apr5g0356 901 Pfam Kinesin motor domain 30 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0356 901 CDD KISc_CENP_E 24 347 - -
Apr5g0356 901 SMART kinesin_4 22 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0356 901 Coils Coil 356 376 - -
Apr5g0356 901 MobiDBLite consensus disorder prediction 557 577 - -
Apr5g0356 901 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0356 Apr-Chr5 3337891 3346043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0356 22 428 Miscellaneous Gene Families AT5G06670 39.277 8.76e-82 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0356 K11498 - gmx:100820012 1544.25