Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0341 ATGGTGAATCTCAACCCAGAAGCTCCTGAATTCTGTCCCACCCAACAAAACAAGCTGCAGCTAGTGCAAGTGCAATCACTTTCCTCTCCTAACTTTCCCACTTCCATATTCACCCCTCAACACTATTACTTCATGGTCTCTTCACTTCCCTCCCGAGAACTTCACCCTTTCTATTATCCCTCCTTATCATTTCCTTTACCTTCTTTCATTCACTTTCACGATGCCACCGTTACCCCCCAACAGGAAACACCCGACGCTGAACCAACTCGTTTTCATAGCACAACAGATGAACCTAACCCTCTTGATGCCCATGCAGTGCACCAACATGAGGAGGAAATTGTGGCTGATGCTGAAGCATGTGGTTCAAAAGGGCTTGTACAGAAGCAAGTGTTTAAGGCGTTTATAACTTGTGGAAGAATGGATAGTCACCGTTCAGATGGGTTTAAGCTGAAGGCTTACGCTAGTAGGAGAAGAAAGGTCGAAGAGGCTGGTCAAGTAAAGAAAAGCAGTGGTCATTTAAGGAACAGACATGTTATGAGGCACCCACATGAACAATACTTCAGGGCTTTTCCCAGGAAGAAACGTTGCTGTCCTGTGGTGCCTGTGCGAGTCGATGGAGATGAAACCACTGTTATGATAAAAAACATCCCTAGCAAATACACGCGAGATATGCTGGTAGAGTTCTTGGACGACCATTGCATGGTGGTGAATAGAAGAGAGAAAGAAGCTGTCAAAGTGAATGGAGAGGAGCACAATATTTTAGCTTTTGATTTCGTTTATTTACCTATAGATTTCAAAAGCGGGTTGAACAAAGGCTACGCTTTTGTAAACTTCACTAAGCCCAAGGCAGCTTGGAAGTTTCTTTTGACAGCCTCCAATATGAAATGGAGCTTGTTCCAGTCCCACAAGATACGTGAAGTGGTTGCCGCACGTCTCCAGGGGAAGGAGAAACTAGAAAGGCACTTTGAAACTATGAGCTTTCCCTGTGAATCCGAGGATGTTCTGCCTGTGTGCTTTAGCCCACCTCGGGATGGGGTTATCAAGGGAAAGCAAAGGACTATGGGGAAGCTTATCAAGTGCCCAGAAGTTTGA 1092 0.4533 MVNLNPEAPEFCPTQQNKLQLVQVQSLSSPNFPTSIFTPQHYYFMVSSLPSRELHPFYYPSLSFPLPSFIHFHDATVTPQQETPDAEPTRFHSTTDEPNPLDAHAVHQHEEEIVADAEACGSKGLVQKQVFKAFITCGRMDSHRSDGFKLKAYASRRRKVEEAGQVKKSSGHLRNRHVMRHPHEQYFRAFPRKKRCCPVVPVRVDGDETTVMIKNIPSKYTRDMLVEFLDDHCMVVNRREKEAVKVNGEEHNILAFDFVYLPIDFKSGLNKGYAFVNFTKPKAAWKFLLTASNMKWSLFQSHKIREVVAARLQGKEKLERHFETMSFPCESEDVLPVCFSPPRDGVIKGKQRTMGKLIKCPEV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0341 363 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 2 54 350 - -
Apr5g0341 363 MobiDBLite consensus disorder prediction 79 99 - -
Apr5g0341 363 SUPERFAMILY RNA-binding domain, RBD 169 295 IPR035979 GO:0003676
Apr5g0341 363 PANTHER RNA BINDING PROTEIN 54 350 - -
Apr5g0341 363 Pfam RNA recognition motif 2 246 322 IPR007201 -
Apr5g0341 363 Gene3D - 139 318 IPR012677 -
Apr5g0341 363 MobiDBLite consensus disorder prediction 79 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0341 Apr-Chr5 3211692 3213382 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0341 - - vun:114170421 431.024