Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0339 ATGGCCTCATCCTCACGAGCAAGGAGTAGCTCGCCATTTTCACACCGGAAACCCTCCACTCCACACTCCTCTTCTTCCTCATCTTCTTCTTCCTTCACCAACGGACGGTTAATGCCTCGCTCCTGTTCTTCTACGTCGTCGTTTTTTAACTCCGGTGGTGGTGGACTCAGTGGCCGATCCATGACTCCGAATCGCGGTCACAGTGAGTTGACCTTCTACGGTTATGGTAGTCCTTCACCGGTGGAGTTCGGGATGGAGGAGGTGATCATGGAACCTGTGGATTCGTCCAGGTCTCGCGATAGCATTTCGGTCACGATTCGGTTCAGACCATTGAGTGAAAGGGAGTATCAGAGAGGGGATGATATCGCGTGGTATGCGGATGGTGATACGATTGTGAGAAATGAATATAATCCAGCTACTGCTTATGCATTTGATAGAGTGTTTGGGCCACATACAAATTCTGATGAGGTGTATGAAGTAGCTGCAAAACCTGTAGTGAAGGCTGCCATGGAAGGGGTCAATGGAACTGTGTTTGCCTATGGTGTGACGAGTAGTGGTAAGACACATACTATGCACGGAGATCAAAATTCTCCTGGCATCATACCACTGGCTATAAAAGATGTTTTCAGCATTATCCAAGATACTCCAGGAAGAGAGTTCTTACTCCGAGTGTCATATCTAGAAATATACAATGAGGTAATAAATGACTTGCTTGACCCGACTAGCCAAAATTTACGTGTTAGAGAAGATGCACAGGGAACTTATGTGGAGGGTATAAAGGAAGAAGTTGTTTTGTCTCCCGGACATGCTCTTTCCTTTATTGCTGCTGGAGAAGAACATCGTCATGTTGGATCAAACAATTTTAACCTCTTTAGCAGCCGAAGTCACACAATTTTTACACTAATGATTGAAAGCAGTGCCCATGGTGAAGATTATGATGGAGTGGTCTTCTCTCAGCTTAATTTGATCGATCTTGCTGGATCTGAGAGCTCGAAAACTGAAACAACTGGATTAAGAAGAAAAGAAGGATCTTACATAAACAAAAGTCTTCTGACACTTGGAACTGTTATTGGAAAATTGAGCGAGGGAAAAGCATCTCATGTTCCATATCGAGACTCAAAGCTTACCCGCCTCCTGCAGTCTTCACTTAGTGGGCATGGCCATGTTTCACTAATCTGCACTGTAACTCCGGCATCCAGTAATTTGGAAGAAACTCACAATACCTTGAAGTTTGCTAGCAGGGCCAAGAGAGTAGAAATATACGCCTCACGTAATAAGATTATTGATGAAAAATCTCTAATTAAGAAATACCAGAGAGAAATTTCAGTCCTCAAACACGAACTTGATCAGCTGAAGAAAGGGCTTCAACTTGGTGTCAACCACGAGGAAATTATGAGCTTAAAGCAAAAGTTGGAAGAAGGTCAAGTGAAAATGCAGTCAAGATTGGAAGAAGAGGAAGAAGCGAAGGTTGCTCTTATGAGTCGGATACAGAGGCTAACCAAGCTCATTCTGGTTTCATCAAAGAATGCAATTCCGGGATATCTATCTGATGCTCCCAGCCACCATCGAAGTCACTCCGTTGGCGAGGATGATAAATTTGATGCCCTACGTGAAGCATCTCTTTTGATCGAAAATGAGAGTCAAAAAGATGTTTCCACTGTGTCATCTGATCCGTCTCATGATGTTAGACATAGAAGATCGTCAAGTAGACCAAACGAAGAACTCTCTCCAACTAGCAGTATCATCGCTGAATCGACGCAAGCTGGTGAACTCATCAGCAGAACAAGGAAACCAGCGGGAGGGATGGCAATGTCTGATGAGATGGATCTTCTAGTCGAGCAAGTCAAAATGCTAGCTGGAGACATTGCTTTCAGTACCAGCACTCTGAAACGCTTAATGGAGCAGTCTGTAAATGATCCTGAAAGCTCCAAAACACAGATTGAGAACTTGGAACAAGATATCCAAGAAAAAAGGAAGCAAATGAGGGTTTTAGAACAAAGAATAATTGAAAGTGGTGAATCTTCCGTAGCTAACTCATCAGTGGTTGAAATGCAGCAGACAATCACAAGATTAATGGCTCAGTGTGATGAAAAGGCCTTTGAGCTGGAGTTAAAATCTGCAGACAACCGTGTCCTTCAAGAACAGTTAAATAATAAGTGTTCTGAAAACAGAGAACTGCAAGAAAAGGTGAAGCTGCTAGAGCAGCACCTGGCAACAGTTACAGTTGGTACCTCGTTAGTGCTAGTAGATCAATGTCCATCTGGAGAAAACATAGATGAGTTGAAAAGGAAAATACAATCCCAGGAGATTGAAAATGAAAAACTGAAGCTAGAGCAAGTTCACTTGTCAGAAGAGAATAGCGGTTTACATGTGCAGAATCAGAAACTCTCTGAAGAAGCTTCTTATGCCAAAGAATTGGCCTCTGCGGCTGCTGTGGAATTGAAGAATTTGGCAGGGGAAGTGACAAAACTTTCCTTGCAGAATGCAAAGTTGGAGAAAGAATTGATGGCTGCTCGAGACCTGGCCAACACTCGAAATGCTGTTGTACAAACAGTCAAAGGAGTTAGCCGCAAGTATAATGATGCAAGACCTGGGAGGAAGGGGAGAATTTCTATCCGTGCTAATGAACCTTTGGGAGTTGGTATGGATGAGTTTGAGTCGTGGAATCTTGATGCTAATGATTTGAAGATGGAGCTGCAGGCTCGGAAACAGCGAGAGGCAGCACTTGAGGCTGCATTAGCTGAAAAGGAATTTGTGGAAGAGGAGTACAGGAAAAAGTTTGAGGAGGGCAAGAAAAAAGAAGCCTCCTTGGAGAATGATTTAGCAAATATGTGGGTTCTTGTTGCTAAGTTAAAGAAAGAAGGAGGTGCTATCCCAGAATCAAACATTGACGAAAAAAATGTTGATGTAGAAGCACATACAAATGATCTGAAACCTAATGACATTGAAAGTAGTATTCTCCCCAAGGAGCATATTTTAACAGATGTATCAAAAACAGACAATGAAATTCCCCAGGCAGAGCCTTTGGTTGTTCGTCTTAAGGCACGCATGCAAGAGATGAAGGAAAAAGAAGTCAGGCACCTTGGGAACGGAGATGCCAATTCCCATGTTTGTAAAGTATGTTTTGAATCTTCAACTGCAGCAATTCTTCTTCCATGTCGTCATTTTTGTTTGTGTAAATCTTGTTCACTTGCTTGCTCTGAATGTCCAATATGCCGCACAAACATTGCAGATAGGCTTTTTGCTTTTACATCTTGA 3258 0.4285 MASSSRARSSSPFSHRKPSTPHSSSSSSSSSFTNGRLMPRSCSSTSSFFNSGGGGLSGRSMTPNRGHSELTFYGYGSPSPVEFGMEEVIMEPVDSSRSRDSISVTIRFRPLSEREYQRGDDIAWYADGDTIVRNEYNPATAYAFDRVFGPHTNSDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTSQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGEDYDGVVFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNLEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKHELDQLKKGLQLGVNHEEIMSLKQKLEEGQVKMQSRLEEEEEAKVALMSRIQRLTKLILVSSKNAIPGYLSDAPSHHRSHSVGEDDKFDALREASLLIENESQKDVSTVSSDPSHDVRHRRSSSRPNEELSPTSSIIAESTQAGELISRTRKPAGGMAMSDEMDLLVEQVKMLAGDIAFSTSTLKRLMEQSVNDPESSKTQIENLEQDIQEKRKQMRVLEQRIIESGESSVANSSVVEMQQTITRLMAQCDEKAFELELKSADNRVLQEQLNNKCSENRELQEKVKLLEQHLATVTVGTSLVLVDQCPSGENIDELKRKIQSQEIENEKLKLEQVHLSEENSGLHVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKLEKELMAARDLANTRNAVVQTVKGVSRKYNDARPGRKGRISIRANEPLGVGMDEFESWNLDANDLKMELQARKQREAALEAALAEKEFVEEEYRKKFEEGKKKEASLENDLANMWVLVAKLKKEGGAIPESNIDEKNVDVEAHTNDLKPNDIESSILPKEHILTDVSKTDNEIPQAEPLVVRLKARMQEMKEKEVRHLGNGDANSHVCKVCFESSTAAILLPCRHFCLCKSCSLACSECPICRTNIADRLFAFTS* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0339 1085 Pfam Zinc finger, C3HC4 type (RING finger) 1036 1077 - -
Apr5g0339 1085 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1011 1082 IPR013083 -
Apr5g0339 1085 ProSiteProfiles Kinesin motor domain profile. 101 418 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0339 1085 Coils Coil 434 454 - -
Apr5g0339 1085 ProSitePatterns Kinesin motor domain signature. 318 329 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr5g0339 1085 MobiDBLite consensus disorder prediction 546 600 - -
Apr5g0339 1085 Coils Coil 814 841 - -
Apr5g0339 1085 Coils Coil 758 785 - -
Apr5g0339 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 455 IPR027417 -
Apr5g0339 1085 Coils Coil 647 667 - -
Apr5g0339 1085 ProSiteProfiles Zinc finger RING-type profile. 1038 1073 IPR001841 -
Apr5g0339 1085 Coils Coil 892 929 - -
Apr5g0339 1085 PRINTS Kinesin heavy chain signature 172 193 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0339 1085 PRINTS Kinesin heavy chain signature 286 303 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0339 1085 PRINTS Kinesin heavy chain signature 319 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0339 1085 PRINTS Kinesin heavy chain signature 368 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0339 1085 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 59 1045 - -
Apr5g0339 1085 SUPERFAMILY RING/U-box 1037 1077 - -
Apr5g0339 1085 Pfam Kinesin motor domain 107 418 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0339 1085 SMART kinesin_4 99 426 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0339 1085 Coils Coil 468 502 - -
Apr5g0339 1085 Gene3D Kinesin motor domain 92 449 IPR036961 -
Apr5g0339 1085 MobiDBLite consensus disorder prediction 1 63 - -
Apr5g0339 1085 MobiDBLite consensus disorder prediction 572 592 - -
Apr5g0339 1085 MobiDBLite consensus disorder prediction 556 571 - -
Apr5g0339 1085 Coils Coil 709 736 - -
Apr5g0339 1085 PANTHER CENTROMERE PROTEIN E 59 1045 - -
Apr5g0339 1085 CDD KISc_CENP_E 104 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0339 Apr-Chr5 3167522 3180686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0339 36 1085 Miscellaneous Gene Families AT4G39050 71.509 0.0 1484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0339 K11498 - gmx:100800460 1783.46