Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0330 ATGAATCGGGAAAAGTTGATGAAGATGGCTGGTTCTGTCAGAACTGGTGGAAAGGGTACCATGAGAAGAAAGAAGAAGGCTGTCCACAAAACAACAACCACAGATGACAAAAGGCTTCAGAGCACCCTGAAGAGAATAGGGGTGAATGCCATCCCTGCAATTGAGGAGGTCAATATCTTTAAGGATGATGTAGTTATCCAGTTTTTAAATCCTAAAGTACAAGCATCTATTGCTGCTAATACTTGGGTTGTTAGCGGTTCTCCACAAACAAAGAAATTGCAGGATATACTCCCTAGCATTATCCACCAATTAGGTCCCGATAACTTGGAAAACCTGAAGAAGCTAGCCGAGCAATTTCAGAAGCAGGCTCCTGAAGCAGGTGGTGGTTCAGCCACAGCACAAGAGGAGAATGATGATGACGTCCCAGAGCTTGTTCCGGGAGAGACTTTTGAGACAGCTGCTGAGGAGACCAAGGCTTCTTCTTAG 486 0.4506 MNREKLMKMAGSVRTGGKGTMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEAGGGSATAQEENDDDVPELVPGETFETAAEETKASS* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0330 161 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT BETA 1 159 - -
Apr5g0330 161 SMART NAC_2 36 91 IPR002715 -
Apr5g0330 161 Pfam NAC domain 36 91 IPR002715 -
Apr5g0330 161 ProSiteProfiles NAC A/B domain profile. 33 97 IPR002715 -
Apr5g0330 161 MobiDBLite consensus disorder prediction 1 27 - -
Apr5g0330 161 Gene3D - 48 104 IPR038187 -
Apr5g0330 161 MobiDBLite consensus disorder prediction 119 161 - -
Apr5g0330 161 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 1 159 IPR039370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0330 Apr-Chr5 3034664 3037800 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0330 K01527 - gmx:100500153 273.092