Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0320 ATGACTCTTAAACTTCAAACAGTGATCTCCACCGCCGCCTCCGTCGCGGCCACCGCCATGCTCCTCCGTTCCTTGACCAGAGACTACCTCCCTCACGACCTCCACCACTACCTCCACTCCAAACTCTCGAAAATCCTCACTGCACTCTCCTCCGAAATCACCCTCGTCATCAACGAATTCGAAGCCCTAACAAACAACCACCTCTTCCACGCCGCACTACTCTACCTCAAACCCCACACCACACCCAACACAAAGCGCTTCAGAGCCACCATGCCTGCGAAATCCTCGCACATCTCCCTCCTCATCGACCGCAACAACGAAATCTCCGACACCTTCAACGGCGTCCAATTCAACTGGAAGCTCGTCTCCGAACAAATCCCCTCCAAATACATCCAATCCGACGATTACCACTCCACCTTGAGATCGGAGGTTCGATTCTTCGAATTGCGGTTCCACAAGAAGCACAAGGAGATGGTGTTGCGAGAGTACTTACAACACGTGATGGAGAAGGCGAAAGAGGCGAGGGAGAAGAGGAAGACGCTGAAGCTCTTCACTCTGAGGGATCGGAGAATGGGAGGGAGGAGGCGCGAGATGTGGCAGGGCGTGAATTTGGATCATCCTGCGACGTTTGAGACTTTGGCGATGGATTCAGATATGAAGAGTATGATAATGGAGGATTTGGATAGGTTTGTGGAGAGAAGGGGTTTGTATAGGAGTGTGGGGAAAGCGTGGAAACGTGGGTACTTGCTTTCTGGGCCTCCTGGGACTGGAAAATCGAGCTTGATTGCTGCAATGGCTAATTATCTGAATTTTGATGTTTATGATTTGGAGTTGACTGATGTTAAGCGTAATTCTGAGTTGAGGAAGTTGTTGATTGCGACGGCGAATCGTTCTATTCTTGTGGTGGAAGATATTGATTGTTCCCTTGAGCTCCATGATAGGCTTAAGCCGAAACCAGTGATTACACTTACAGCAACCACTATGCCCCACCACCTATTTGATGATCAAAAACCCCAGGTGACTTTATCGGGATTTCTGAATTTCGTAGATGGGTTGTGGTCGAGCTGTGGGGATGAGCGGATCATAGTGTTCACAACCAATCACAAAGAGAAATTGGACCCTGCTCTGTTGCGCCCTGGCCGAATGGATGTGCACATCGACATGACATACTGCACCCCATGCGGGTTCAAAATGCTGGCTTCCAATTACCTCGGGATCACACAACACCCACTTTTTGATGAAGTAGACAAGTTGCTAGGGACGACGAATGTCACTCCTGCAGAGGTGGGTGAGCAGTTTTTGAAGTATGAGGACCCTGAAATTGCTGTCAAAAGCCTGCTCCATCTCCTTATAGAGAAGGGCAATTAG 1368 0.4956 MTLKLQTVISTAASVAATAMLLRSLTRDYLPHDLHHYLHSKLSKILTALSSEITLVINEFEALTNNHLFHAALLYLKPHTTPNTKRFRATMPAKSSHISLLIDRNNEISDTFNGVQFNWKLVSEQIPSKYIQSDDYHSTLRSEVRFFELRFHKKHKEMVLREYLQHVMEKAKEAREKRKTLKLFTLRDRRMGGRRREMWQGVNLDHPATFETLAMDSDMKSMIMEDLDRFVERRGLYRSVGKAWKRGYLLSGPPGTGKSSLIAAMANYLNFDVYDLELTDVKRNSELRKLLIATANRSILVVEDIDCSLELHDRLKPKPVITLTATTMPHHLFDDQKPQVTLSGFLNFVDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHIDMTYCTPCGFKMLASNYLGITQHPLFDEVDKLLGTTNVTPAEVGEQFLKYEDPEIAVKSLLHLLIEKGN* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0320 455 CDD AAA 245 390 - -
Apr5g0320 455 Pfam ATPase family associated with various cellular activities (AAA) 249 388 IPR003959 GO:0005524|GO:0016887
Apr5g0320 455 ProSitePatterns AAA-protein family signature. 360 378 IPR003960 GO:0005524|GO:0016887
Apr5g0320 455 Gene3D - 387 453 - -
Apr5g0320 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 430 IPR027417 -
Apr5g0320 455 Pfam Domain associated at C-terminal with AAA 30 122 IPR025753 -
Apr5g0320 455 PANTHER BCS1 AAA-TYPE ATPASE 6 453 - -
Apr5g0320 455 SMART AAA_5 244 392 IPR003593 -
Apr5g0320 455 Gene3D - 199 386 IPR027417 -
Apr5g0320 455 PANTHER - 6 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0320 Apr-Chr5 2899496 2901717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0320 237 382 Miscellaneous Gene Families AT3G02450 30.323 1.69e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0320 K08900 - gmx:100789716 664.455