Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0313 ATGGCAGCATCTCCATTGAACCCAAAATCCCATTTCCATGCTCGCTCAAAAAGCTTGCCCTCTAGACCACACCCTCTCATCCTACAATGCAATGAGCACTTGGAAAGATTAAGGGCATCCCATGAAACCTCCTCTTCCTCTTCATTACTTAACCAAAAGCTAGGAGGGTTGCAAGATCTGCATGAATGTGTTGAAAAATTGTTCCAACTTCCTCTCACTAAAGAAGCACTTCACCATCATTGTCAAGAAAATTGGGTAGATGAACTTTTGAATGGATCCTTAAGGCTCTTAGATGTGTGCACAGCCACCAAAGACTCTCTACTGCATACAAAAGAGTGCATGAGAGAACTTCAATCAATTATGAGAAGAAGAAAGGGAGGTGAAGTGGAGCTCAAGGCAGAGATTAAAAAATTCTTGGCTTCAAGGAAGGTGGTCAAGAAGGCCATCTCAAAAGCCTTGACAAATTTGAAGGGTACCACAAAAAATTGCAACATTTCATCTACAAACAAAGAAAATCAAACACTAGCTTTGGTTAGCTTATTAGAGAATGTGGAAGTAGTCACTCTATCAACATTTCAGGCACTACTACACTTTATATCAGGGACAACACAATCAAAGTCAAGCAATTGGCTTTTGGTTTCCAAGTTAATGCAAACCAAGAAAGTAGCTTGCTCACAGTTAGTAGATGAAAGTGAATTTGCCCAACTTGATGAAGCATTGCAATCCTGCATGTTTTCCCAAACAAGCAAATTTGACAACATGACTAAGCTTAAAAACCATTTGGAGAAACTGGAATCGCTTATTCAAGATCTCGAAGAAGGGCTTGATTTTCTGTTTAGGCGTTTGATTAAGATTAGAGTTGCCCTTCTTAACATTCTCAACCACTAG 888 0.3964 MAASPLNPKSHFHARSKSLPSRPHPLILQCNEHLERLRASHETSSSSSLLNQKLGGLQDLHECVEKLFQLPLTKEALHHHCQENWVDELLNGSLRLLDVCTATKDSLLHTKECMRELQSIMRRRKGGEVELKAEIKKFLASRKVVKKAISKALTNLKGTTKNCNISSTNKENQTLALVSLLENVEVVTLSTFQALLHFISGTTQSKSSNWLLVSKLMQTKKVACSQLVDESEFAQLDEALQSCMFSQTSKFDNMTKLKNHLEKLESLIQDLEEGLDFLFRRLIKIRVALLNILNH* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0313 295 MobiDBLite consensus disorder prediction 1 24 - -
Apr5g0313 295 PANTHER DUF241 DOMAIN PROTEIN 1 294 - -
Apr5g0313 295 Coils Coil 254 281 - -
Apr5g0313 295 PANTHER BPS1-LIKE PROTEIN 1 294 - -
Apr5g0313 295 Pfam Protein BPS1 53 292 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0313 Apr-Chr5 2862519 2863406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0313 - - gmx:100802945 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0313 5 2862519 2863406 Apr5g0313 5 2862519 2863406 ECH