Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0312 ATGGTGTCTACTTGTGTGAGCTTGAAAGCCAATACCCATTTAGTAAAATCGAGGAATGACACTTTTCGTAAAGATGATGGTTTTTTCGGTGAAAGAATCAAAGGGAGTCTGAATTACAGTCCCTGGATCATTAATCAATTGGCAACAAGTTTGAGAACCCAGGATAGGGTCAAGAAGACCAAACCTGGGGTTGTATCTGCTGTTATTACATCAAATGACACCAAAGAATCTGTGACCTTTCAAGTGCCATCTTTTTTCAGAAGAAAGGCTGACCCAAAAAATGTTGTTTCCATCATATTGGGAGGGGGTCCTGGGATTCAACTCTTTCCTCTCACCAAAAGAGCTGCCACACCTGCTGTCCCCGTTGGTGGATGCTACAGGCTTATAGACATCCCAATGAGCAACTGCATCAACAGTGGCATTAACAAAATATTTGTATTGACTCAGTTCAACTCCGCATCCCTCAACCGTCACATCTCCCGCACATATTTTGGAAACGGAATCAATTTTGGGGATGGGTATGTGGAGGTTCTGGCAGCTACTCAAACACCAGGAGAAGCTGGAAAGAAATGGTTCCAAGGCACAGCAGATGCTGTGAGGCAGTTTACATGGGTATTTGAGGATGCCAAGCACACAAACGTTGAGAATGTATTGATTTTGGCTGGAGATCATCTATACCGAATGGATTACATGGACCTTGTGCAGAGTCACGTTGATAGAAATGCAGATATTACAGTATCATGTGCTGCTGTTGGGGACAGCCGTGCATCAGATTATGGATTGGTCAAGGTAGATGGCAGAGGTCGCATCATCCAATTTTCTGAAAAACCCAAAGGTGCTGATCTGAAAGCAATGCAAGTAGATACCTCGGTCTTTGGCTTGTCACCCCAAGATGCAATAAAGTCGCCATATACTGCATCGATGGGGGTTTATGTGTTCAAGACAGATGTCTTACTCAAGCTTCTGAAATGGAGATACCCTACGTCCAATGACTTCGGATCTGAAATAATTCCTGCAGCTGTGAGGGAACACAATGTCCAAGCATATTTTTTCGGAGACTATTGGGAAGACATTGGAACAATAAAGTCATTTTATGATGCTAACATGGCTCTTACTGAAGAGAATCCAATGTTCAAATTTTATGATCCCAAGACACCCATTTACACATCTCCAAGATTCCTTCCACCAACAAAGATTGATAAATGTCGGATTGTGGATGCAATAATCTCCCATGGATGTTTCCTGAGAGAATGTACTGTTCAACATTCCATTGTGGGTGAACGTTCACGTTTGGATTATGGAGTTGAGCTCCAGGACACTGTGATGATGGGAGCTGACAATTACCAAACAGAATCTGAAATTGCTTCTCTGGTGGCAGAGAGCAAGGTTCCCATTGGGATTGGAAGGAACACCAAAATTAGGAACTGCATAATTGACAAGAATGCAAAGATCGGGAAAGATGTCATCATCATGAACAAAGATGGTGTTCAAGAAGCAGATAGACCTGAAGATGGATTTTACATTCGATCAGGAATCACGATCATATTGGAGAAGGCAACCATAGAAGATGGCACTGTCATATAA 1584 0.4255 MVSTCVSLKANTHLVKSRNDTFRKDDGFFGERIKGSLNYSPWIINQLATSLRTQDRVKKTKPGVVSAVITSNDTKESVTFQVPSFFRRKADPKNVVSIILGGGPGIQLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHISRTYFGNGINFGDGYVEVLAATQTPGEAGKKWFQGTADAVRQFTWVFEDAKHTNVENVLILAGDHLYRMDYMDLVQSHVDRNADITVSCAAVGDSRASDYGLVKVDGRGRIIQFSEKPKGADLKAMQVDTSVFGLSPQDAIKSPYTASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPAAVREHNVQAYFFGDYWEDIGTIKSFYDANMALTEENPMFKFYDPKTPIYTSPRFLPPTKIDKCRIVDAIISHGCFLRECTVQHSIVGERSRLDYGVELQDTVMMGADNYQTESEIASLVAESKVPIGIGRNTKIRNCIIDKNAKIGKDVIIMNKDGVQEADRPEDGFYIRSGITIILEKATIEDGTVI* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0312 527 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 82 392 IPR029044 -
Apr5g0312 527 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE 1 527 - -
Apr5g0312 527 SUPERFAMILY Trimeric LpxA-like enzymes 389 527 IPR011004 -
Apr5g0312 527 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 95 491 IPR011831 GO:0005978|GO:0008878
Apr5g0312 527 CDD LbH_G1P_AT_C 395 521 - -
Apr5g0312 527 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 527 IPR011831 GO:0005978|GO:0008878
Apr5g0312 527 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 306 316 IPR005836 GO:0005978|GO:0008878
Apr5g0312 527 Gene3D Hexapeptide repeat proteins 393 527 - -
Apr5g0312 527 Pfam Nucleotidyl transferase 97 373 IPR005835 GO:0009058|GO:0016779
Apr5g0312 527 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 191 199 IPR005836 GO:0005978|GO:0008878
Apr5g0312 527 CDD ADP_Glucose_PP 98 358 - -
Apr5g0312 527 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 488 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0312 Apr-Chr5 2848191 2853180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0312 K00975 - gmx:100808791 988.408