Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0310 ATGGAAGGAACTGGAGGCAGCAGTGCCTCGGCTGCTGCACCCGTGAACCAATGGTGGCAAGAATTTTCGAAGCTATTTCAATATTATTTGGATAAATCTACCCCGCACACTACGTATAGATGGGTTGGGACTTTGGTTATTGCGGCGATCTATGTTTTGCGGGTTTTTTATGTCCAAGGATTTTATATCGTGTCATATGGACTTGGAATCTACCTGCTGAATCTGTTGATTGGGTTTCTGTCACCTTTGGTTGATCCTGAGCTGGAGCCGTCGGATGGACCTTTGCTACCGACTAAAGGTTCTGATGAGTTCAAACCGTTCATTCGCCGACTGCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCATTTGTGATGACTTTCTTTTCTGTATTTGATGTTCCTGTCTTCTGGCCAATATTACTCTGTTATTGGATTGTTCTATTTGTTCTTACAATGAGGCGCCAAATTGCACACATGATCAAATACAAATACATTCCATTCAACTTTGGAAAGCAGAAGTATAGTGGCAAGAAATCTGCTGCAAGCAGCAGTGGCACCCGCGCTGACTGA 585 0.4342 MEGTGGSSASAAAPVNQWWQEFSKLFQYYLDKSTPHTTYRWVGTLVIAAIYVLRVFYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFNFGKQKYSGKKSAASSSGTRAD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0310 194 PANTHER PROTEIN RER1A 1 189 - -
Apr5g0310 194 PANTHER PROTEIN RER1 1 189 IPR004932 GO:0016021
Apr5g0310 194 Pfam Rer1 family 18 180 IPR004932 GO:0016021
Apr5g0310 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0310 Apr-Chr5 2826585 2829867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0310 1 194 Miscellaneous Gene Families AT2G21600 77.436 7.10e-112 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0310 - - gmx:100817031 325.094