Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0304 ATGAACTCCAATGACAACCAAGGCCTCTGCATTAACCACCCTCGCAGGCTCTCTGACTTCCTACATAACCTGAACATGACATATGTAAAAGTTGTATACCATTATTTGATCTCCTACCTTTTCACTCTGTGCCTGATTCCTCTCACTGCTCTCATCATCTTTCAAGCCTCCAACATGACTCTAGACAAGATTCACCAGCTTTGGCTCAACTTGCAGTACCACTTGTTAGACAACTTGGTCAGTGTTGTCCTTTGTTGCACTGTCTTTGTGTTTGGAATCACTGTTTACATCATAAGGAAGCCAAGATCTATCTACTTGGTAGACTTTGCATGTTACAAACCCCCTGCTCAACTTAAAGTTAACTATGACAAATTCATGTATCACACCGTTCTCACTAGGGACTTCAATGATTCTTCACTTGAGTTTCAAAGGAAGATTCTCGAGCGCTCTGGCCTTGGAGAGGAAACTTATGTCCCTCAAGCAATGCACAACATCCCACCAACGCCAACCATGGCTGCTGCAAGAAATGAGGCTGAGCAAGTCATGTTTGGTGCTCTAGATGCACTTTTTTCCAACACCAAAGTCAATCCAAAGGACATTGGGATTCTTGTTGTGAATTGCAGCTTGTTCAATCCCACCCCTTCCCTAGCTTCTATTATTGTCAACAAGTACAAGATGAGGTGCAATGTCAGGAGCTTCAACTTAGGGGGCATGGGTTGCAGTGCCGGTGTTATAGCTATTGATCTTGCTAAGGACTTGCTTCATATTTATGGGAACAGTTATGCTGTAGTGGTTAGCACTGAGAACATCACTCAGAATTGGTACTTTGGGAACACGAAATCCATGTTGATACCAAATTGTCTGTTTCGCGTTGGTGGTGCAGCGATTTTGCTTTCTAACCAGGCTTGTGATAGGCTTCAAGCTAAGTATGAGCTTCTTCACACTGTGAGGACTCATAAAGGTGCAGATGAGAAGGCATTCAGATGTGTCTATCAGAAGCAGGATGATGCTGGAAAAATTGGTGTGTCCTTGTCAAAGGATCTCATGACTATTGCTGGTGGAGCCCTCAGGACTAACCTTACAACTTTGGGTCCCCTTGTGCTACCCATGAGGGAGCAACTTCTCTACTTGTATGATTTGGTGATCAAGAAGATATTTGGTTCAACTAAAAAGCCTTACATCCCAAATTTCAAGCATGCTTTTGATCATTTCTGCATTCATGCTGGTGGTAGGGCAGTGATTGATGAGATTGAGAAGAATCTGCAACTTCAGAGTGAGCATGTTGAGGCATCGAGAATGACTCTGCACAGGTTTGGGAACATTTCATCCAGCTCTATTTGGTATGAGTTAGCTTACATGGAAGCAAAGAGCAGGATAAAGAAGGGAAACCGAGTCTGGCAGGTTGCATTTGGCAGTGGATTCAAGTGTAACAGCGCAGTCTGGAAGGCCTTGACCAATGTGGAGCCCTCACCAAAAAGTCCTTGGGATGATTGCATTCATAGGTACCCTATTAAGGTTACTTCATAG 1527 0.4375 MNSNDNQGLCINHPRRLSDFLHNLNMTYVKVVYHYLISYLFTLCLIPLTALIIFQASNMTLDKIHQLWLNLQYHLLDNLVSVVLCCTVFVFGITVYIIRKPRSIYLVDFACYKPPAQLKVNYDKFMYHTVLTRDFNDSSLEFQRKILERSGLGEETYVPQAMHNIPPTPTMAAARNEAEQVMFGALDALFSNTKVNPKDIGILVVNCSLFNPTPSLASIIVNKYKMRCNVRSFNLGGMGCSAGVIAIDLAKDLLHIYGNSYAVVVSTENITQNWYFGNTKSMLIPNCLFRVGGAAILLSNQACDRLQAKYELLHTVRTHKGADEKAFRCVYQKQDDAGKIGVSLSKDLMTIAGGALRTNLTTLGPLVLPMREQLLYLYDLVIKKIFGSTKKPYIPNFKHAFDHFCIHAGGRAVIDEIEKNLQLQSEHVEASRMTLHRFGNISSSSIWYELAYMEAKSRIKKGNRVWQVAFGSGFKCNSAVWKALTNVEPSPKSPWDDCIHRYPIKVTS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0304 508 SUPERFAMILY Thiolase-like 90 305 IPR016039 GO:0016746
Apr5g0304 508 PIRSF Very_long_ch_3-ktacl-CoA_syn 19 508 IPR012392 GO:0006633|GO:0016020|GO:0016747
Apr5g0304 508 PANTHER 3-KETOACYL-COA SYNTHASE 4 11 507 - -
Apr5g0304 508 CDD CHS_like 87 481 - -
Apr5g0304 508 Pfam FAE1/Type III polyketide synthase-like protein 97 384 IPR013601 GO:0006633|GO:0016020|GO:0016747
Apr5g0304 508 SUPERFAMILY Thiolase-like 313 482 IPR016039 GO:0016746
Apr5g0304 508 Pfam Chalcone and stilbene synthases, C-terminal domain 404 479 IPR012328 -
Apr5g0304 508 Gene3D - 109 483 IPR016039 GO:0016746
Apr5g0304 508 PANTHER 3-KETOACYL-COA SYNTHASE 11 507 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0304 Apr-Chr5 2757476 2759002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0304 12 506 Miscellaneous Gene Families AT2G16280 71.111 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0304 K15397 - vvi:100853861 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0304 5 2757476 2759002 Apr5g0304 5 2757476 2759002 ECH