Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0291 ATGGAGGAGAAACGCCGCGACGCCCCTTCCTCCGCCGTCGATTCGCCGGCATCGGAGCCCGCATCGTCTCGCCGCCGTGCCGGAGGTAACAAAAGGAAGGCCAGTGCTCTCAACGCCTCCAATTCCTCCTCCACGCCCTCCAAACGCACTTCTCGCGACAAGGCCTCGCCTCTTCACCCTCCTCCGCTCCACAATGGCCCCTTGACCAGGGCTCGCCAAACCCCTAACAACCTCTCCGCCGCCGCCGTCGCCGGTTCCGCTTCTGCTCCCGCCGCCGTCAAACACTCCGAACGCGCTGCCCTCATCCAGGCTTCAGGCGCAGACTCGGTGGCGCTCGCGGAGCAACTCAAGAAGGAGAGCGAGTGGGAGACTCTCGAAGCTGCGATTGAAGCTGAATTCGAAGCTATCAGATCTCGTGGTACCAATGCTCATGTCGTTCCCACTCATTGCGGTTGGTTTTCATGGTCATGTATCCATCCAATTGAGAAGCAAGCGTTGCCTTCTTTCTTTAATGGAAAAACTGAAAATCGAACTCCTGATGTCTACATGGAGATACGGAATTGGATAATGAAGAAGTTTCATTCAAATCCAAATGTACAAATTGAATTAAAAGACATATCAGAGCTTAATGTCGGAGACTTGGATGCTAGGCAAGAGATAATGGAGTTTTTGGACTACTGGGGTTTAATTAACTTCCACCCATTCCCTTCAATGGATTCTGCTGTGGCCAGTGCCAGTGAGGATGGGGAAGCAGAAAAAATTTCCTTGCTTGAAAAATTATATCGCTTTGAAACTCTCCAGTTATGTCCGCCTGTTGTTCAGAAGTCTAGCCAAATGACATCATCTGTGTCCTCTGGCTTGTTTCCAGAGTCTGCAATTGCTGAGGAGTTGGTTAAACAAGAGGGCCCAGCAGTTGAGATGCTCGAGTACCATTGCAACTCTTGTTCTGCTGATTGTTCTCGCAAACGTTACCATTGCCAGAAGCAGGCAGATTTTGATCTATGTACCGACTGCTTTAGTAATAGAAGATTTGGCTCTGGCATGTCTTCATTGGATTTTATACTCATGGAACCAGCTGAAGTTGCAGGGGTTAATGGTGGAAAGTGGACTGATCAAGAGACCCTCCTGCTCCTTGAAGCATTAGAACTATATAAAGAAAATTGGAATGAAATTGCAGAACATGTTGGAACAAAATCAAAAACTCAGTGCATATTGCACTTTGTTCAAATGCCAATTGAGGATGCCTTTGTTGACTGTGATGATAATGTTGATGCTGATTGCAAAGAAACTGCAGATCCAGCTTCAGCAAACAATAACTCATCTATGGACAAAGATGCTACAGAAATTGTTGAGAATGACTCTAGTGATGGCATTAAAGGCCATGATGAAACTTCCAAGGCTGAAGATGTTAAAGCCAATGTTAATCATGAGGAGATTCCAAAGTTACATGGTGGTGATGAGAAAACTAGTGAGGGAACTACTAAATCAGAAGATGCTGTTATAGTAAAGTCTGATCAGGAAGCAGGCAATGACTGTGCTCTAAATGCTCTTAAGGAAGCATTCACAGCTGTTGGTTATTCTCCTGAAGGCCCTTCTTCATTTGCTGAAGTGGGTAATCCTGTCATGGCACTGGCAGCATTCCTTGCACACTTGGTGGGTTCTGATGTGGCTGTTGCTTCAGCTCATAGCTCCATAAAATCCATGTCAGGAAATTCTTCTGGCACCGAGCTTGCTGCAAGGTATTGCTTTCTTTTAGAAGATCCACCTGATAATAAGAAGGAATCAACTAGTTCTGAGAGGGATTCTAAAAGTGAGGGAGATCAGGATGAAGTAAATGTAAAACAGGATAAACCAGTGTTGGATGATAAAGATTTACCAAATGATCATGATAACATGAAAATTGAGAGTAATGCTTTAGAAGACAAGGGACAGCTGGCTTCTACAGATGATGGAGCCTCAGGAAAGCCAATTTCTTCAAAGGAGCAAGCAATGATTAATCATGAATCTGGGCTTGATAATTGTAATGATCCCAACAGTGCAAAGCTACCCAATGATCAAGCACCAGGCACTCTGCATAGTTCAGGTGGTTCAACATCCAAGGCTGAAATTCCACCTAGTTCTGACGAGGTTCAGGAGGGAACTTTAATTGAAGAACCTAGCCGTTCTGTTGAGGAACTAAAGGATAGATGTGTGTCTGATCCTCTTCTATCAGAGAAGAAAGAACTTCATCAGTCAATTAAATCTAACATACCAGGAGAGCATCCAAAGCCAGTGGAGACCCCGAAAAGTGCTGCGATGGTTTCTGATTCGATTCCCTCAGCTAAAAACAAGCCGCAAAATTTGCAATCTATAAATCCAGTCGGTGGGTCTCTGGAATCAACAGACTCAGTTATGGATGTTGATGGAGTTACGAATTCCTTGCAATCTGAAAAGATTGACTCTCAGCCACTAATTACACCAAAAGGATCCCAATGTAATGGGACTGAAAAGGATGTAGACATGGTGTCACCTCCTGTTAGATCAAGTTATGGTCCTGAAAATGGTGCAAACACAGGGGCAGGTGGAGATCATGCAGAGAATGGCACAAAAGTGAAAGATGATGGTACAAAGACTAAACAGGATAGCAATTTTGAGAAAGTGAAACGTGCTGCTGTTTCTACCCTCGCTGCTGCAGCGGTTAAAGCAAAACTTCTAGCAAGTCAGGAAGAAGACCAAATCCGACAGCTTACTTCTTTATTGATAGAAAAGCAGTTGCATAAGTTGGAAACAAAGCTGGCTTTTTTCAATGATGCGGAGAATGTGGTGATGAGGGCAAGGGAGCATGTGGAGCGGTCACGACATAAGCTTTATCATGAGCGTGCTCTGATTATTGCATCCCGGCTTGGTTTACCAGCTTCCTCATCTAGAGGTGCACCATCTGTACCAACCAACAGAATTCCCATGAATGTTGCAAACTCACTCCCAAGACCACAAATCATGATGAATCCGCAAAGGCCACTGATTTCTAGACCTGTAGGCACTGTAGCTAATACTCTTCAAAACCCATTAGCATCTGCAACTGCAGCAGGAAATTCAGTTAGGCCATCCAGCCAGGAAAATCTTTCTTCTGTTGGGACAAAATAG 3123 0.4499 MEEKRRDAPSSAVDSPASEPASSRRRAGGNKRKASALNASNSSSTPSKRTSRDKASPLHPPPLHNGPLTRARQTPNNLSAAAVAGSASAPAAVKHSERAALIQASGADSVALAEQLKKESEWETLEAAIEAEFEAIRSRGTNAHVVPTHCGWFSWSCIHPIEKQALPSFFNGKTENRTPDVYMEIRNWIMKKFHSNPNVQIELKDISELNVGDLDARQEIMEFLDYWGLINFHPFPSMDSAVASASEDGEAEKISLLEKLYRFETLQLCPPVVQKSSQMTSSVSSGLFPESAIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKSKTQCILHFVQMPIEDAFVDCDDNVDADCKETADPASANNNSSMDKDATEIVENDSSDGIKGHDETSKAEDVKANVNHEEIPKLHGGDEKTSEGTTKSEDAVIVKSDQEAGNDCALNALKEAFTAVGYSPEGPSSFAEVGNPVMALAAFLAHLVGSDVAVASAHSSIKSMSGNSSGTELAARYCFLLEDPPDNKKESTSSERDSKSEGDQDEVNVKQDKPVLDDKDLPNDHDNMKIESNALEDKGQLASTDDGASGKPISSKEQAMINHESGLDNCNDPNSAKLPNDQAPGTLHSSGGSTSKAEIPPSSDEVQEGTLIEEPSRSVEELKDRCVSDPLLSEKKELHQSIKSNIPGEHPKPVETPKSAAMVSDSIPSAKNKPQNLQSINPVGGSLESTDSVMDVDGVTNSLQSEKIDSQPLITPKGSQCNGTEKDVDMVSPPVRSSYGPENGANTGAGGDHAENGTKVKDDGTKTKQDSNFEKVKRAAVSTLAAAAVKAKLLASQEEDQIRQLTSLLIEKQLHKLETKLAFFNDAENVVMRAREHVERSRHKLYHERALIIASRLGLPASSSRGAPSVPTNRIPMNVANSLPRPQIMMNPQRPLISRPVGTVANTLQNPLASATAAGNSVRPSSQENLSSVGTK* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0291 1040 MobiDBLite consensus disorder prediction 1 72 - -
Apr5g0291 1040 MobiDBLite consensus disorder prediction 766 830 - -
Apr5g0291 1040 PANTHER SWI/SNF COMPLEX-RELATED 41 1004 - -
Apr5g0291 1040 Pfam Zinc finger, ZZ type 309 344 IPR000433 GO:0008270
Apr5g0291 1040 MobiDBLite consensus disorder prediction 859 875 - -
Apr5g0291 1040 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 364 403 IPR017930 -
Apr5g0291 1040 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 41 1004 - -
Apr5g0291 1040 MobiDBLite consensus disorder prediction 651 705 - -
Apr5g0291 1040 MobiDBLite consensus disorder prediction 586 637 - -
Apr5g0291 1040 MobiDBLite consensus disorder prediction 1019 1040 - -
Apr5g0291 1040 SMART zz_5 306 350 IPR000433 GO:0008270
Apr5g0291 1040 Pfam SWIRM domain 147 232 IPR007526 GO:0005515
Apr5g0291 1040 CDD SANT 385 410 IPR001005 -
Apr5g0291 1040 Pfam Myb-like DNA-binding domain 367 409 IPR001005 -
Apr5g0291 1040 Pfam SWIRM-associated region 1 887 963 IPR032451 -
Apr5g0291 1040 MobiDBLite consensus disorder prediction 34 51 - -
Apr5g0291 1040 Gene3D - 364 415 - -
Apr5g0291 1040 ProSiteProfiles SANT domain profile. 368 415 IPR017884 -
Apr5g0291 1040 SUPERFAMILY Homeodomain-like 151 233 IPR009057 -
Apr5g0291 1040 CDD ZZ_RSC8 310 354 IPR041984 -
Apr5g0291 1040 ProSiteProfiles Zinc finger ZZ-type profile. 307 361 IPR000433 GO:0008270
Apr5g0291 1040 SMART sant 365 413 IPR001005 -
Apr5g0291 1040 SUPERFAMILY Homeodomain-like 364 416 IPR009057 -
Apr5g0291 1040 MobiDBLite consensus disorder prediction 452 495 - -
Apr5g0291 1040 Gene3D - 150 235 IPR036388 -
Apr5g0291 1040 MobiDBLite consensus disorder prediction 714 747 - -
Apr5g0291 1040 ProSiteProfiles Myb-like domain profile. 361 411 IPR001005 -
Apr5g0291 1040 SUPERFAMILY RING/U-box 302 355 - -
Apr5g0291 1040 Gene3D - 304 353 IPR043145 -
Apr5g0291 1040 ProSiteProfiles SWIRM domain profile. 144 241 IPR007526 GO:0005515
Apr5g0291 1040 ProSitePatterns Zinc finger ZZ-type signature. 312 338 IPR000433 GO:0008270
Apr5g0291 1040 MobiDBLite consensus disorder prediction 586 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0291 Apr-Chr5 2579493 2585235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0291 310 407 EF-hand Containing Proteins AT3G07740 37.069 7.91e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0291 K11649 - gmx:100799723 1575.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0291 5 2579493 2585235 Apr5g0291 5 2579493 2585235 ECH