Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0286 ATGACTGAGAACAAGGCAGTGGAAGCTCATAAAACTCTTGAGGATTTCGATCCTCAAAAGAAGCCCAAAAGGAATAAGTTCGCTTTTGCTTGTGCTATGTTGGCCTCCATGACTTCCATCTTGCTTGGCTATGATATTGGCGTGATGAGTGGAGCTGCCATCTACATACAGAGAGACCTGAAAGTATCTGACGTGCAAATCGAGATTCTGCTCGGAATCATCAACCTCTACTCTCTCATAGGTTCATGCCTGGCCGGCAGAACCTCCGATTGGATAGGTCGCCGTTACACCATTGTCTTCGCCGGCGCCATATTCTTCGCCGGAGCCTTACTCATGGGCTTCTCCCCCAACTATGCCTTTCTCATGTTCGGCCGTTTCGTCGCCGGTGTTGGCATCGGCTACGCCCTCATGATTGCCCCCGTCTACACCGCCGAAGTGTCCCCCGCTTCGTCTCGTGGCTTCCTCACTTCCTTCCCCGAGGTTTTTATCAATGGAGGGATATTACTGGGATACATATCGAACTATGCGTTTTCGAAGATGAAACTTCGCTTGGGTTGGCGAATGATGCTTGGAATCGGCGCAATTCCATCTGTAATTCTGGCGGTGGGTGTGTTGGCCATGCCGGAGTCCCCACGATGGCTTGTGATGAGGGGTCGTTTGGGAGAGGCAAAAGTAGTTCTTAACAAAACCTCAGACAGCAAGGAAGAGGCTCAGCTAAGGCTAGCCGACATCAAACAAGCCGCTGGGATCCCCGAGAGTTGCAACGACGACGTCGTTCAGGTGACTCAGCGAAGCACGGGTGAGGGTGTATGGAAGGAACTGTTCCTTTATCCAACGCCCGCAATTCGTCACATTTTAATCGCGGCGCTTGGGATTCACTTCTTTCAACAAGCGTCGGGCATAGACGCCGTCGTTTTATACAGCCCCAAGATATTCGAAAAGGCTGGGATCACGAGTGACACTGATAAGCTTCTTGCAACCGTGGCCGTTGGATTCGTTAAGACAATGTTCATCTTAGTGGCCACGTTTATGTTGGACCGTGTTGGGCGTCGTCCGTTACTATTGTCTAGTGTTGGGGGCATGGTGCTCTCGCTTCTGGCGCTTGCTACGAGCCTCACCATCATTGATCATTCGGAGAAAAAGCTTATGTGGGCCGTTGGATTGAGCATAGCGACGGTGTTATCCTACGTGGCCACTTTCTCCATTGGTGCGGGACCTATCACCTGGGTCTATAGCTCTGAGATCTTCCCGTTGAGGCTGAGGGCGCAGGGTGCGGCTGCGGGAGTTGTGGTTAATAGAGTCACAAGTGGGGTTATCTCAATGACTTTTCTGTCCCTATCCAAAGCGATTACCATTGGTGGAGCTTTCTTCCTCTTCGCGGGTATTGCGACTACTGGGTGGCTATTCTTTTACACCTTACTCCCCGAAACACGGGGGAAAACACTTGAAGAAATGGAAGGGTCTTTTGGTAAATTTAAGGGGAAATCCGACACCGCCAAGGACGTGGTTCACAATGGTAATGCGGCAGTGCCCCAAGTCCAGCTAGGGACCAATCTCCGAACTTAG 1566 0.5121 MTENKAVEAHKTLEDFDPQKKPKRNKFAFACAMLASMTSILLGYDIGVMSGAAIYIQRDLKVSDVQIEILLGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGAIFFAGALLMGFSPNYAFLMFGRFVAGVGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKMKLRLGWRMMLGIGAIPSVILAVGVLAMPESPRWLVMRGRLGEAKVVLNKTSDSKEEAQLRLADIKQAAGIPESCNDDVVQVTQRSTGEGVWKELFLYPTPAIRHILIAALGIHFFQQASGIDAVVLYSPKIFEKAGITSDTDKLLATVAVGFVKTMFILVATFMLDRVGRRPLLLSSVGGMVLSLLALATSLTIIDHSEKKLMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAAAGVVVNRVTSGVISMTFLSLSKAITIGGAFFLFAGIATTGWLFFYTLLPETRGKTLEEMEGSFGKFKGKSDTAKDVVHNGNAAVPQVQLGTNLRT* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0286 521 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr5g0286 521 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 509 IPR045262 GO:0015144
Apr5g0286 521 SUPERFAMILY MFS general substrate transporter 17 486 IPR036259 -
Apr5g0286 521 CDD MFS_PLT 34 485 IPR044776 GO:0005351
Apr5g0286 521 TIGRFAM SP: MFS transporter, sugar porter (SP) family 19 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0286 521 PANTHER SUGAR TRANSPORTER 14 509 - -
Apr5g0286 521 Pfam Sugar (and other) transporter 32 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr5g0286 521 Coils Coil 227 247 - -
Apr5g0286 521 Gene3D MFS general substrate transporter like domains 21 492 IPR036259 -
Apr5g0286 521 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 478 IPR020846 GO:0022857
Apr5g0286 521 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0286 521 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0286 521 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0286 521 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0286 521 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr5g0286 521 ProSitePatterns Sugar transport proteins signature 2. 127 152 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0286 Apr-Chr5 2498810 2502351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0286 14 518 Organic Solute Cotransporters AT3G18830 73.529 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0286 - - gmx:100800461 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0286 5 2498810 2502351 Apr5g0286 5 2498810 2502351 ECH