Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0282 ATGGGGAAAGGAGGTGGTTGCTTTCCAATGAAAAAGCTGAAAGTTTTCATTGTGTTCTACTCAACCTATGGTCATGTGGAGTCATTGGCAAAGTCCTTGAAGAAGGGGGTTGATTCAATTGAAGGAGTTGAAGGGCTGTTGTACCGTGTGGTGGAGACACTGTCTAAGGAGGTGTTGGAACTCATGAAGGCACCTGAGAAGGATGAAAAGGTGCCACTCATATCTGCAGAGAAGTTGTTGGAAGCTGATGGATTGTTATTTGGGTTTCCAACAAGGTATGGAAGCATGGCGGCGCAGATGAAGGCGTTTTTTGATTCCACAGGTCAATTATGGAGAGAGCAGAAGCTGGTTGGTGTGCCTGCTGGCTTCTTTGTCAGTACTGGCACTCAGGGTGGTGGTCAAGAAACCACAGCATGGACAGCAATCACACAGTTAGTCCACCATGGAATGCTCTATGTTCCTATTGGTTATTCTTTCGGTGCTGGAATGTTTGAAATGGACTCCATTAGAGGTGGATCTCCATATGGTGCTGGAGTTTTTGCTGGTGATGGCTCAAGGCAAGCAAGTGAAACAGAGCTGGCCCTTGCTGAGTATCAAGGAAGGTACATGGCAACAATAGTCAAGAAGTTGGGCCAGAAAAGCTAG 645 0.4667 MGKGGGCFPMKKLKVFIVFYSTYGHVESLAKSLKKGVDSIEGVEGLLYRVVETLSKEVLELMKAPEKDEKVPLISAEKLLEADGLLFGFPTRYGSMAAQMKAFFDSTGQLWREQKLVGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLYVPIGYSFGAGMFEMDSIRGGSPYGAGVFAGDGSRQASETELALAEYQGRYMATIVKKLGQKS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0282 214 Pfam NADPH-dependent FMN reductase 67 155 IPR005025 GO:0016491
Apr5g0282 214 Gene3D - 11 211 IPR029039 -
Apr5g0282 214 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 14 210 IPR010089 GO:0003955|GO:0010181
Apr5g0282 214 PANTHER NAD(P)H:QUINONE OXIDOREDUCTASE, TYPE IV PROTEIN 10 214 - -
Apr5g0282 214 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 10 214 - -
Apr5g0282 214 ProSiteProfiles Flavodoxin-like domain profile. 15 203 IPR008254 GO:0010181
Apr5g0282 214 SUPERFAMILY Flavoproteins 14 210 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0282 Apr-Chr5 2461936 2463822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0282 K03809 - gmx:100809530 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0282 5 2461936 2463822 Apr5g0282 5 2461936 2463822 ECH