Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0280 ATGGAGGCATACAAGAAAGTTATGATGGTTGGGATGTTAATGGCCATTGTGATGATTGGATCAACGCCCATGTTGGCCAATGGGCAGTACAGCTCATTTTGCCATATGCCCATAGAAGGGTTGAAGGCATGCTTGCCTTGTGTGAGTGGTGACAATCCTATTGATCCTCCAACTTCTGCTTGTTGTTCAGGTATTGCTAAGGCTGATCTTCAATGCTTCTGTCATTACAAGGATTCAGGCTTGCTCTCTATCTATGGTGTTGATCCCACCAAAGCCATGGATCTACCTGTTAAGTGCAAGATTGTGGACTCTTTCCACTGCCAGAAACACTAG 333 0.4505 MEAYKKVMMVGMLMAIVMIGSTPMLANGQYSSFCHMPIEGLKACLPCVSGDNPIDPPTSACCSGIAKADLQCFCHYKDSGLLSIYGVDPTKAMDLPVKCKIVDSFHCQKH* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0280 110 PANTHER LIPID BINDING PROTEIN-RELATED 9 107 IPR039265 GO:0005504|GO:0009627
Apr5g0280 110 Gene3D - 31 107 IPR036312 -
Apr5g0280 110 CDD nsLTP_like 34 107 IPR044741 -
Apr5g0280 110 PANTHER LIPID TRANSFER PROTEIN 9 107 - -
Apr5g0280 110 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 107 IPR036312 -
Apr5g0280 110 SMART aai_6 34 107 IPR016140 -
Apr5g0280 110 Pfam Probable lipid transfer 15 106 IPR016140 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0280 13 107 Acyl Lipid Metabolism Gene Families AT5G48490 35.789 2.77e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0280 - - aprc:113865173 236.884