Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0278 ATGGCAGTTCTTAGACCTGCAAGTTCAAGTTTTGTAGCAAAGTATTATTCTCTAGCTCCATTGAGGATTTTACGTGGTCTGGTGTGCCTGCTTGTGCTGCTTTCAACAGCATTTATAATGTTAGTGTACTTCGGCTTTATAAGTGCTGTTATAGTGAGACTTTTTAGCATAAGTTACAGCAGAAAGGCAACTTCTTTTTTCTTTGGTGCTTGGTTAGCTTTGTGGCCTTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTATTTTCTGGAGATATTGTTCCTTCTAGAGAACGGATCTTACTGATTGCAAATCATAGAACTGAGGTTGACTGGATGTATTTATGGGACTTTGCCTTGCGGAAGGGATGCCTTGGATACATAAAGTATGTACTTAAGAGCAGCTTGATGAGACTTCCAATTTTTGGTTGGGCATTTCACATACTGGAGTTCATCCCTGTGGAAAGAAAGTGGGAAGCTGACGAGTCAACCATGCGCCATATGCTTTCAACATTCAAGAATCCCCAAGATCCTCTCTGGCTTGCTCTTTTCCCAGAAGGCACTGATTTTACCGAGCAAAAGTGCCTTCGGAGTCAAAAATATGCTGCTGAGCAAGGGTTACCAATTCTGAAAAACGTTTTACTTCCGAAGACAAAGGGCTTCTGCACCTGCTTGCAAGAGTTGAGGGACTCTCTCTCTGCAGTTTATGATGTGACCATTGGCTACAAATACCACTGCCCATCTTTCTTGGACAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATTCATATCTGCCGCCTCCCCCTTGATTGTATCCCAGAATCTGAAGAAGAAATTTCCATGTGGTTGATGCATAGATTCCAGTTGAAGGATTGGTTACTTTCCAATTTTCAAAGTCAAGGTCAGTTTCCCAATCAAGCAACAGAAAGGGACCTCTCTGCTGTGAAGTGCATTTTAAATTGTATGACAATCATTATGTTGACAGGCACATGCATGTACTACAGTTTTTCCTCTGTTTGGTTTAAACTTTATGTGTCTTTAGTCTGTGCTTATTTGGTTCCAGCCACATATTTCAATATTCGGCCACTGCCCATTCTTGGCCTTTTGAATATGCGATCAAATTGCCTCATTTCAAATACTTGA 1146 0.4084 MAVLRPASSSFVAKYYSLAPLRILRGLVCLLVLLSTAFIMLVYFGFISAVIVRLFSISYSRKATSFFFGAWLALWPFLFEKINKTKVVFSGDIVPSRERILLIANHRTEVDWMYLWDFALRKGCLGYIKYVLKSSLMRLPIFGWAFHILEFIPVERKWEADESTMRHMLSTFKNPQDPLWLALFPEGTDFTEQKCLRSQKYAAEQGLPILKNVLLPKTKGFCTCLQELRDSLSAVYDVTIGYKYHCPSFLDNVFGVDPSEVHIHICRLPLDCIPESEEEISMWLMHRFQLKDWLLSNFQSQGQFPNQATERDLSAVKCILNCMTIIMLTGTCMYYSFSSVWFKLYVSLVCAYLVPATYFNIRPLPILGLLNMRSNCLISNT* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0278 381 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Apr5g0278 381 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 372 - -
Apr5g0278 381 CDD LPLAT_LCLAT1-like 76 265 - -
Apr5g0278 381 Pfam Acyltransferase C-terminus 254 311 IPR032098 -
Apr5g0278 381 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 372 - -
Apr5g0278 381 SMART plsc_2 100 222 IPR002123 GO:0016746
Apr5g0278 381 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 33 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0278 Apr-Chr5 2437368 2439570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0278 14 365 Miscellaneous Gene Families AT1G75020 64.306 1.42e-164 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0278 K13513 - gmx:100814885 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0278 5 2437368 2439570 Apr5g0278 5 2437368 2439570 ECH