Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0276 ATGAAGGCTTTGAGTCCCATAAACACCTCAAATCCATGTCTTCCCAAAACCCATTTCCCCAAAGTCCCTATCTTTCACTTCTTCAAATTCAAGCCATTCTCATACAACACCCATGTTGCAAAGAGAGTTCACACTCTTCCATTCAGCATAAACTGCAAGCTGAAAACTTCTCAAGATATCAAAAACAATGGGAAGAAGGGCGTGTCACAGAAAATTGTCTTATCAGAAGCGTCACCTCCACCACTCACAGAGGATGCTGACATCAATGGTGATGTTCCAGCAACCTCAAAGAAGAATGGAGGCCCTTTTGGATTGGCCAAGATGTTGAGTAGGAAGATGTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGGGAGATGTTCGCCGTTGCTACTTTGATGGCTTTGGGCACAATTATTGATCAAGGTGAGGCCCCTGACTTTTATTTCCAGAAATACCCTGAAGATCATCCCATGTTTGGATTTTTTACTTCGAGATGGATTCTCGCCCTTGGTTTTGATCACATGTTTTCATCCCCTATATTTCTTGGAGTCTTGGCTCTCCTGGGTGCATCCCTTATGGCCTGCACTTACACAACTCAAATTCCCCTCATCAAGGTTTCAAGAAGATGGTCATTTTTGAACTCTTCTGAGGCTATACGTAAGCAAGAATTTTCAGAATCGTTGCCAAGAGCATCAGTCCAAGATGTTGGTACTTTATTGATGGGAGCTGGATATGAGGTATTCTTAAAAGGACCATCCTTATACGCTTTTAGAGGGCTAGCAGGTCGGTTGGCCCCTGTTGGAGTCCATATAGCCCTGCTGCTGATAATGGCTGGAGGAACTCTCAGTGCTGCTGGGAGCTTCAGAGGTTCAGCCACTGTGCCCCAGGGGCTAAATTTTGTTGTAGGTGATGTTCTGGGTCCTACTGGCTTTCTCTCCTCTCCAACTGAGGCTTTTAATACAGAGATTCATGTTAACAGATTCTACATGGATTATTATGAAAGTGGAGAGGTTTCACAGTTCCACACCGATCTTTCCCTTTTTAACATGGATGGGAAGGAAGTGATGAGGAAAACAATCAGTGTAAATGATCCTTTAAGATATGGTGGTATCACCATATACCAGACAGATTGGAGTATTTCGGCTTTGCAAATTCTGAAGGACAATGAAGGACCATATAACTTGGCTATGGCACCTCTGAAGATCAACGGAGATAAGAAACTTTTTGGTACTTTCCTACCGGTTGGAGATATTAACTCTCCTGATGTTAAGGGAATACGGCCTAATTCAAAGCTACCAATCAATATTGATGGCACAGAAATTGTCATTGTTGATGCAATAGGAAGTAGTGGCATGGACTTGAAGACTGACCCAGGTGTGCCAGTTGTGTATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGCTATTTGTCTCATTCACAGATATGGGCTTTACAAGATGGAACAACAGTCATCATTGGAGGGAAGACGAATAGAGCAAAGATGGAGTTTCCAGAGGAGATGAATCGCATACTTGATAAGGTCCCTGAAATAGTTGAATCATCACTATCTAAGCAAGCTGATAGCATTAGTGGTTAG 1608 0.4285 MKALSPINTSNPCLPKTHFPKVPIFHFFKFKPFSYNTHVAKRVHTLPFSINCKLKTSQDIKNNGKKGVSQKIVLSEASPPPLTEDADINGDVPATSKKNGGPFGLAKMLSRKMLQILSNLPLAIGEMFAVATLMALGTIIDQGEAPDFYFQKYPEDHPMFGFFTSRWILALGFDHMFSSPIFLGVLALLGASLMACTYTTQIPLIKVSRRWSFLNSSEAIRKQEFSESLPRASVQDVGTLLMGAGYEVFLKGPSLYAFRGLAGRLAPVGVHIALLLIMAGGTLSAAGSFRGSATVPQGLNFVVGDVLGPTGFLSSPTEAFNTEIHVNRFYMDYYESGEVSQFHTDLSLFNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLFGTFLPVGDINSPDVKGIRPNSKLPINIDGTEIVIVDAIGSSGMDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVIIGGKTNRAKMEFPEEMNRILDKVPEIVESSLSKQADSISG* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0276 535 Pfam ResB-like family 122 386 IPR007816 -
Apr5g0276 535 Pfam ResB-like family 431 511 IPR007816 -
Apr5g0276 535 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 110 516 IPR023494 -
Apr5g0276 535 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 78 527 IPR023494 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0276 24 527 Miscellaneous Gene Families AT1G49380 64.353 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0276 K07399 - gmx:100807003 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0276 5 2406298 2410440 Apr5g0276 5 2406298 2410440 ECH