Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0271 ATGCATGAAATAAAGTGGCGGGATTCTGGTTTCAAGCAATTCAAGTTCATGGACCCAACTGTGTCAATTCCAAGTCACAACCGCTCTAACAGTGACCCAATGAAAAGGAGATTATTCATGGGAGATGAATTAGAGAGCATCAGTGAAACTTCTTATAGGCCTGAAGTGGAACTGGGGGAACTAAAGAAAAGCATTGAATCCAAGAAGAGGCAACACCATAATATGGATCTCCAAAGTTCCTTAACTCAAGAGATTCTACAGCTTCAAAAACGATTACAGCAACAATTTGTGATACGGCATACATTAGAGAAAGCAAGTTATCTGCCTATTTCACAGGATGCTACAATAGAAAGTTCAATACCCAAGGCTGCAAAGGAACTGATTAAGGAAATTGGAATATTAGAATTAGAAGTCGTGTATTTGGAACAATATCTTCTGTCTTTGTATCGGAAAAGGTTTGATCAACAAATTTCATCTCTATCAACCAAGGAAAGGAGATTGGACTTAGCTTCAGACATTAACCAAGGAACGTCTACAGCGCCTGGCAGTGGTGCTATCTATGACAAAGAAATTTCAGTTGTGCACTCTAGTCATCACATTTCTCCCAGTAATTCAGCTGACTTTCAGATCAAGGAATGCAATAACCAGTTGGAACCAGAAACTGTTTTAGACTCTAGCATTCATCGATGTCACTCAGCGCTATCTCAACAAACAACATGCTCAATTGAAGCTTCTCCTGTGAACATTGAGACCAAAGCTTTAGACTCTTACCATTCTCTACCATTATCCATGTTAGAGCAAGCTCAGTGCGCTAAATCCAGTTCAACCAGCTTGGCAGAGCATCTTGGGAATTGCTGTGTGGATAATGTTCCAGAAACACCAAATTGGCTTTCTGAGGAGATGATTAAGTGCATATCAGCTATATATTGTGAACTTGCAGAGACACCTTCTCTTGGTCATAAAAATGCTTCATCCCCTATTTCATTCTCATCATCTGGCTATGATTTATCTTCACAGAGCCAGAGTAGTAAGTTGGGATCACAATGGAAGAAACATTCATCCATCAATTTAAACTCCAGTAACCCTCTCCACGTCAGAGGCTTCAAAGAATTTAATGGACCTTATTGCTCAATGATAAGGATACATCAATTGTGCACAGATAACCAGAAATTAAAAGAAATTGAGTACATGCTCCGTAGATTTAGGTCACTTGTTTCTCGGCTAGAAGAAGTTAATCCTAAAAATATGAAGCACGAAGAAAAGCTCGCCTTTTGGATTAATGTGCACAATGCCTTAGCAATGCATGCCTTATTAGTTTACGGAATTGCAGCCAACAATGATAAAAGAATGTCTTCAGTACTTAAGGCTGCATATAACATTGGAGGACATACTATAAGCGTAGACCTGATACAGAATTTCATTCTGGGATGCAGATTGCCTCGTCCAGGACAATGGCTGCGGTCATGGTTTCCTTCAAAGACAAAACCAAAAGTTAGAGATGCAAGAAAAGGATATGCTATACATCATCCAGAACCTTTATTATTATTTGCTCTTTGCTCTGGAAGCCATTCTGATCCCGCGGTACGTTTGTACACATCCAAGAGAGTCTTGGAGGAGCTAGTATCTGCGAAAGAAGAATACATTCAGTCCACCATCACCACAAGCAAGGAACAGAAAATAGTTCTCCCAAAGATAGTTGATTCCTATGCAAAGAATTCAGGTCTAGGAGCATCAAATTTGATGGAGATGGTTAAGCCTTATCTACCAGATTCTCAAAAGAGAATTCAAGAGCTTCAATCAAAGACAAGCTGGAAAGGAATTGAATTAACCCCTCATAACTTCACTTTCCATTACTTGATTTCAAAGGAATTAGCTTGGTAA 1881 0.3934 MHEIKWRDSGFKQFKFMDPTVSIPSHNRSNSDPMKRRLFMGDELESISETSYRPEVELGELKKSIESKKRQHHNMDLQSSLTQEILQLQKRLQQQFVIRHTLEKASYLPISQDATIESSIPKAAKELIKEIGILELEVVYLEQYLLSLYRKRFDQQISSLSTKERRLDLASDINQGTSTAPGSGAIYDKEISVVHSSHHISPSNSADFQIKECNNQLEPETVLDSSIHRCHSALSQQTTCSIEASPVNIETKALDSYHSLPLSMLEQAQCAKSSSTSLAEHLGNCCVDNVPETPNWLSEEMIKCISAIYCELAETPSLGHKNASSPISFSSSGYDLSSQSQSSKLGSQWKKHSSINLNSSNPLHVRGFKEFNGPYCSMIRIHQLCTDNQKLKEIEYMLRRFRSLVSRLEEVNPKNMKHEEKLAFWINVHNALAMHALLVYGIAANNDKRMSSVLKAAYNIGGHTISVDLIQNFILGCRLPRPGQWLRSWFPSKTKPKVRDARKGYAIHHPEPLLLFALCSGSHSDPAVRLYTSKRVLEELVSAKEEYIQSTITTSKEQKIVLPKIVDSYAKNSGLGASNLMEMVKPYLPDSQKRIQELQSKTSWKGIELTPHNFTFHYLISKELAW* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0271 626 Pfam Protein of unknown function, DUF547 414 548 IPR006869 -
Apr5g0271 626 Pfam Leucine-zipper of ternary complex factor MIP1 76 155 IPR025757 -
Apr5g0271 626 PANTHER UNCHARACTERIZED 24 626 - -
Apr5g0271 626 PANTHER TERNARY COMPLEX FACTOR MIP1 LEUCINE-ZIPPER PROTEIN 24 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0271 Apr-Chr5 2361991 2366066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0271 - - gmx:100803450 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0271 5 2361991 2366066 Apr5g0271 5 2361991 2366066 ECH