Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0268 ATGGCCACCAACGTTGAGGGCAAAGGTTTCACCGAAGAGCAAGAAGCTCTGGTGGTCAAATCATGGAACCAAATGAAGAATAATTCTCCACAACTGAGTCTCACGTTTTTCAAGAAAATATTGGAGATTGCTCCACCAGCTAAGCAACTCTTCTCCTTCTTGAAAGATTCAGACCTTCCTTTGGACCAAAACCCCAAGCTCATGTCCCATGCCATGGCTGTCTTTGTCATGACCTGTGAATCAGCGGTTCAACTTAGGAAAGCTGGTAAAGTCACTGTGAGAGAATCAAACTTGAAAAAGTTAGGTGCTACTCATTTTAAAGCAGGTGTAGTAGCCGAGCATTTCGAGGTAACCAAGGCGGCACTTGTAGAGACCGTAAAAGAAGCAGTGCCTGAAATGTGGTCACCGGCAATGAAAAAAGCATGGGAAGAAGCTCATGATCAGCTGGCTGATGCCATCAAATCCGAAATGAAACCCTCCTCTTAG 486 0.4506 MATNVEGKGFTEEQEALVVKSWNQMKNNSPQLSLTFFKKILEIAPPAKQLFSFLKDSDLPLDQNPKLMSHAMAVFVMTCESAVQLRKAGKVTVRESNLKKLGATHFKAGVVAEHFEVTKAALVETVKEAVPEMWSPAMKKAWEEAHDQLADAIKSEMKPSS* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0268 161 ProSiteProfiles Globin family profile. 10 158 IPR000971 GO:0020037
Apr5g0268 161 Gene3D Globins 9 156 IPR012292 GO:0019825|GO:0020037
Apr5g0268 161 PRINTS Plant globin signature 11 28 - -
Apr5g0268 161 PRINTS Plant globin signature 36 56 - -
Apr5g0268 161 PRINTS Plant globin signature 64 92 - -
Apr5g0268 161 PRINTS Plant globin signature 129 155 - -
Apr5g0268 161 PANTHER NON-SYMBIOTIC HEMOGLOBIN 5 159 - -
Apr5g0268 161 SUPERFAMILY Globin-like 9 158 IPR009050 -
Apr5g0268 161 Pfam Globin 35 153 IPR000971 GO:0020037
Apr5g0268 161 ProSitePatterns Plant hemoglobins signature. 64 75 IPR019824 GO:0019825|GO:0020037
Apr5g0268 161 PANTHER LEGHEMOGLOBIN-RELATED 5 159 IPR001032 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0268 Apr-Chr5 2352183 2353226 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0268 - - gmx:100809295 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0268 5 2352183 2353226 Apr5g0268 5 2352183 2353226 ECH