Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0267 ATGACAACCTCCGAGGTCAAAGGTTTCACGGAAGAGCAAGAAGCTTTGGTCGTGAAATCATGGAACGTCATGAAGAAGAATTCAGGAGAACTTGGTCTCAAGTTTTTCTTGAAAATATTTGAGATTGCTCCATCCGCTCAGAAATTGTTCTCATTCTTGAGAGATTCAAAAGTTCCTTTGGAGCAAAACCCGAAGCTCAAGCCCCATGCCATGTCTGTCTTTGTCATGACTTGTGAATCAGCGGTTCAACTGCGGAAGGCTGGTAAAGTCACCGTTAGAGAATCTAACTTGAAAAAATTAGGTGCTACCCATTTTAAAACCGGCGTGGCCAATGAGCATTTTGAGGTAACAAAGTTCGCACTTTTGGAGACCATAAAAGAAGCTGTGCCTGAAATGTGGTCGCCTGACATGAAGAATGCATGGGGAATAGCTTATGATCAGCTGGTCGATGCCATTAAAGCTGAAATGAAACCCTCCTCTTAA 483 0.4306 MTTSEVKGFTEEQEALVVKSWNVMKKNSGELGLKFFLKIFEIAPSAQKLFSFLRDSKVPLEQNPKLKPHAMSVFVMTCESAVQLRKAGKVTVRESNLKKLGATHFKTGVANEHFEVTKFALLETIKEAVPEMWSPDMKNAWGIAYDQLVDAIKAEMKPSS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0267 160 Gene3D Globins 7 155 IPR012292 GO:0019825|GO:0020037
Apr5g0267 160 ProSiteProfiles Globin family profile. 9 157 IPR000971 GO:0020037
Apr5g0267 160 CDD class1_nsHb-like 9 157 - -
Apr5g0267 160 PANTHER LEGHEMOGLOBIN-RELATED 5 158 IPR001032 GO:0019825|GO:0020037
Apr5g0267 160 PANTHER NON-SYMBIOTIC HEMOGLOBIN 5 158 - -
Apr5g0267 160 SUPERFAMILY Globin-like 5 157 IPR009050 -
Apr5g0267 160 PRINTS Plant globin signature 10 27 - -
Apr5g0267 160 PRINTS Plant globin signature 35 55 - -
Apr5g0267 160 PRINTS Plant globin signature 63 91 - -
Apr5g0267 160 PRINTS Plant globin signature 128 154 - -
Apr5g0267 160 Pfam Globin 34 152 IPR000971 GO:0020037
Apr5g0267 160 ProSitePatterns Plant hemoglobins signature. 63 74 IPR019824 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0267 Apr-Chr5 2347677 2348836 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0267 - - gmx:102661758 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0267 5 2347677 2348836 Apr5g0267 5 2347677 2348836 ECH