Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0263 ATGGATGAATTACCTGGCTCCGTGGGTACCAGTGCCAGCTTGAGTCTGAGATTGGGCCAGACCATGTTCTCTTCTGCTTCACTTCTCTTTATGTCTTTGGGGGTTGAATTCTACAGCTACACGGCTTTCTGGTACTTTCTCTTTGTCTATTTGGTGACAATTATGGGTCTGGTCATACCATGGAGTTTCACATTAGCACTAGTGGATGGATATTCTGTTATGGTCAAATGCCCCATTCGTCAACCTGGAATACTGCTGATTATTGTTGTGGGAGATTGGGTGTTATCAACCCTCACACTAGCAGCAGCTTGCTCAACAGCTAGTGTTGTAGATCTCCTGCTCAACGTGCAGGAGTCCTTTTGCCCTCCAAAGCTTTGTGGCAGCATGAGAAATACGAAGGGACAGGATTTTAAATGA 417 0.4556 MDELPGSVGTSASLSLRLGQTMFSSASLLFMSLGVEFYSYTAFWYFLFVYLVTIMGLVIPWSFTLALVDGYSVMVKCPIRQPGILLIIVVGDWVLSTLTLAAACSTASVVDLLLNVQESFCPPKLCGSMRNTKGQDFK* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0263 138 Pfam Casparian strip membrane protein domain 8 126 IPR006702 -
Apr5g0263 138 PANTHER CASP-LIKE PROTEIN 5B3 1 128 IPR045009 -
Apr5g0263 138 PANTHER CASP-LIKE PROTEIN 5C3 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0263 Apr-Chr5 2335916 2338142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0263 - - gmx:100810360 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0263 5 2335916 2338142 Apr5g0263 5 2335916 2338142 ECH