Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0246 ATGGTGATGGCCGCCAACTCCAGTTCCATAACATTTGGAATTGGTTCCTTCACAACTTCCCCATTCTCTACAACTAGAACCTGCTGCACTCACGTTCTTGTCACTAAAAGAGTAACTTTTCCGTTCAGTCTCATTCTGTCCCAGAGGAGGAGGTACTCAATTACTTCACTTAGCGGTATTCTTTCAAGTCCCACTGAGACAACTCTCAGACATCTCAATACACCAATTTCAGCCCTTAATTCAGGTTTAGAAGCATCAATTACGGATTCCAGCGAAATTTCAGCCGCCTTAACAAATGCCAAAGTAGTAGTAGAATCCCAAGACGAAAATAAGATACAACTAAGAGTGGACTTGACTGGTGATCAAACACAGAGGGTATTTGACAAGATCCTGATAAACTTAGGTCGTACTGCCCCACCAGTTCCTGGATTTCGAATGCAAAAAGGAGGAAAATCATCCAAGATCCCAAATAGCTTCCTTATTGAGATGCTTGGAGAAGAACGGGTCACCAAGTTTGTAATACAAGAAATACTCAATTCTACCATGGCTGATTACGCGAGAAATGAAAACTTGGATGTGAAGGAGCGGAAGATAAGCACCACTCAAACGGCAGAAGAACTCAAAAAATTATTCACGCCTGGAAATGAATTTGGCTTCAATGTTATAATTGAGCCAGAAAATTCATAA 687 0.4119 MVMAANSSSITFGIGSFTTSPFSTTRTCCTHVLVTKRVTFPFSLILSQRRRYSITSLSGILSSPTETTLRHLNTPISALNSGLEASITDSSEISAALTNAKVVVESQDENKIQLRVDLTGDQTQRVFDKILINLGRTAPPVPGFRMQKGGKSSKIPNSFLIEMLGEERVTKFVIQEILNSTMADYARNENLDVKERKISTTQTAEELKKLFTPGNEFGFNVIIEPENS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0246 228 SUPERFAMILY Trigger factor ribosome-binding domain 101 218 IPR036611 GO:0006457|GO:0015031
Apr5g0246 228 Pfam Bacterial trigger factor protein (TF) 101 222 IPR008881 GO:0006457|GO:0015031
Apr5g0246 228 Gene3D - 102 225 IPR036611 GO:0006457|GO:0015031
Apr5g0246 228 PANTHER OS01G0894700 PROTEIN 52 227 - -
Apr5g0246 228 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 52 227 IPR005215 GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0246 - - var:108339891 288.5