Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0245 ATGCTGTCTCCCTCACTCGCACTCTCCTGCGTTCCCAAACCGCCAAAATCCTTTTCACCTTTCCATTTCTCTGATTTTAATTTTATCAACAAGTCGAGTTTCAGCAAGTCTTCGCCAACGGTTCTGCTTCGTTGTTCTAAGGAAAGGCAAGATGAGAGAATGACCACTGTATCAATTAAAAACAATGATGTTTTAAGCAGCAACTCACCAGTGCTTCAGCAAAATGGCCTACCTCCTCTAGTCAGTGCATTGAAAGCCTCGGCTGAACAAAAAACTGCCAGTTTTCACTTTCCTGGGCATAATAGAGGGCATGCTGCACCTGCTTCATTGACCCGGCTTATCGGAACTAGACCATTTATTCATGACTTGCCTGAGCTTCCTGAACTTGACAACCTCTTTTGTCCCCAGGGTCCCATATTAGAAGCACAAAAAGAAGCAGCCAAACTGTTTGGGTCGTCACAGACGTGGTTTCTTGTTGGAGGTACTACTTGTGGGATACAGGCAGCAATAATGGCAACCTGTTCTCCGGGAGAATACCTGATTCTTCCAAGGAATTGTCATATTTCAGCTATATCTGCTATTGTATTATCTGGTGTGGTGCCGAAGTACATTATTCCTGACTACGAGACTGATTGGGACATTATTGGTGGTGTCACTCCATTACAGGTATTGAAAGCCATACAGGAACTAGAAATGGAAGAGAAAAAAGCAGCAGCAGTCTTCATCACTTCTCCTACATATCATGGTATTTGCAGTAACTTGAGCGAGATTTCTGAGCTGTGTCATTCTCGTAAAATTCCTTTAATCGTTGATGAAGCTCATGGTGCACACTTAGGCTTTCATTCTGAACTGCCTAACTCAGCCCTCCAGCAAGGGGCTGATCTGACTGTACAGTCCACTCACAAGGTTCTATGCTCTCTTACTCAGTCATCAATGCTGCACATGTCAGGTAATATTGTAGATATGGAAAAAATTTCTAGATGTCTTCAAACTCTTCAAACAACAAGCCCTAGTTATCTGCTTCTGGCATCTCTGGATGCTGCCAGAGCTCAACTTAGTGAAAGCCCTGATATTGTATTCAATCAAGCAATCGCATTAGCCCATGAAACGAAGTGCATGCTTAAACAGATCCCTGGAATCTCAGTGCTCGAGAATTCAAGCTTTCCAACCTTTCCTGCAGTTGATCCATTACGTCTCACTGTAGGTTTTTGGAAGCTGGGTTTGTCAGGTTATGAAGCAGATGAAATCTTATACATGGATTATGGAGTTGTCTGTGAACTTGTTGGGAATAAATCTATCACTTATGCACTTAATCTTGGAACATGTAGGGACCATGTCCAAATGCTTTTATTGGGAATAAAGCATCTAGCTGCAACTTATGCTTGCAATCTGCAACCTGAAGAGAAAGTGCTTAGTTGTCATGCACCCTTTGATGATATAATCATGAATTTGATACCTAGAGATGCCTTTTTTGCTTGTAAAAGAAAAGTAGCAATAAAGGAGAGCCTCGGGGAGGTTGCAGGGGAGCTTATATGTCCATACCCTCCGGGCATACCAATATTGATCCCCGGTGAGATTATTACCAAAAAAGCTATTGATTATCTGCTCCACGTTAGGAGTAAAGGTGCTGACATTAGTGGAGCATCTGATCCCTCACTTTCTTCTATAGTTGTTTGCAATGTATAG 1686 0.4247 MLSPSLALSCVPKPPKSFSPFHFSDFNFINKSSFSKSSPTVLLRCSKERQDERMTTVSIKNNDVLSSNSPVLQQNGLPPLVSALKASAEQKTASFHFPGHNRGHAAPASLTRLIGTRPFIHDLPELPELDNLFCPQGPILEAQKEAAKLFGSSQTWFLVGGTTCGIQAAIMATCSPGEYLILPRNCHISAISAIVLSGVVPKYIIPDYETDWDIIGGVTPLQVLKAIQELEMEEKKAAAVFITSPTYHGICSNLSEISELCHSRKIPLIVDEAHGAHLGFHSELPNSALQQGADLTVQSTHKVLCSLTQSSMLHMSGNIVDMEKISRCLQTLQTTSPSYLLLASLDAARAQLSESPDIVFNQAIALAHETKCMLKQIPGISVLENSSFPTFPAVDPLRLTVGFWKLGLSGYEADEILYMDYGVVCELVGNKSITYALNLGTCRDHVQMLLLGIKHLAATYACNLQPEEKVLSCHAPFDDIIMNLIPRDAFFACKRKVAIKESLGEVAGELICPYPPGIPILIPGEIITKKAIDYLLHVRSKGADISGASDPSLSSIVVCNV* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0245 561 Gene3D Molybdopterin biosynthesis moea protein, domain 2 497 551 - -
Apr5g0245 561 SUPERFAMILY PLP-dependent transferases 78 456 IPR015424 -
Apr5g0245 561 PANTHER ARGININE DECARBOXYLASE 53 560 - -
Apr5g0245 561 CDD Orn_deC_like 79 371 IPR000310 GO:0003824
Apr5g0245 561 Gene3D - 78 357 IPR015421 GO:0003824
Apr5g0245 561 SUPERFAMILY Ornithine decarboxylase C-terminal domain 415 559 IPR036633 GO:0003824
Apr5g0245 561 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 496 541 IPR008286 GO:0003824
Apr5g0245 561 Pfam Orn/Lys/Arg decarboxylase, major domain 78 376 IPR000310 GO:0003824
Apr5g0245 561 PANTHER ARGININE DECARBOXYLASE 53 560 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0245 - - gmx:100819143 915.22