Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0240 ATGGCCGTCAACGACGCCGATCAATCCAATAAGGCTCACAGGACTCGCCAATCTGGCTCCAAATCAGTCAAGAAGAAGCATAAGAAGATAAAGCATGATGCCGGAGAGAATCAGAAAAATCAAAACCCTAAGGCATTCGCCTTCTCTTCCTCTAACAAAGCCAAGCGACTACAATCACGCGCTGTCGAGAAAGAGCAGCGCCGCCTTCACGCTCCTATCATCGACCGTTCTTACGGTGAGCCCGCTCCATACGTCGTCGTAGTGCACGGTCCTCCTCAGGTTGGGAAGTCACTGTTGATAAAGTGTCTAATCAAGCATTACACGAAGCATAATTTGCCTGATGTTCGAGGTCCAATTACTATCGTTTCAGGAAAGCAAAGGCGGTTGCAGTTTGTGGAATGCCCAAATGATATCAATGGCATGATAGATGCGGCAAAGTTTGCAGATCTCGCACTTCTTCTCATAGATGGGAGTTATGGTTTTGAAATGGAAACCTTTGAATTCCTTAATATATTGCAAGTTCACGGTTTCCCGAAGGTCATGGGAGTTCTCACACATCTTGATAAATTCAACGATCCTAAAAAGTTGAGGAAAACAAAACAACGACTCAAACACCGGTTTTGGACTGAAATATATGATGGTGCTAAGTTATTTTACTTATCAGGCCTTATTCATGGAAAGTATGTCAAACGTGAAGTTCACAATCTTGCTCGATTTATTTCTGTCATGAAGTTTCATCCCTTATCCTGGCGAGCTGGTCACCCCTATGTTTTGGTAGATCGTTTTGAAGATATCACTCCTCCTGAAAAAGTGCATGCAAATAATAAATGTGACAGAAAAGTCACCCTTTATGGTTATCTCAGGGGCTGTAATTTGAAAAAGGGCAATAAGGTGCACATAGCTGGAGTGGGCGATTATAGTTTAGCTAGTATTACTGATTTACCTGATCCATGCCCTCTTCCATCTGCTGCAAAAAAGAAGGGATTGCGTGATAAGGAAAAATTATTCTATGCTCCAATGTCTGGCCTTGGGGATCTTTTGTATGACAAAGATGCTGTATACATAAATATTAATGATCACTTTGTTCAATTCTCAAAAGTTGATAATGAGGACTCTGCCATGACAAGCAAAGGAAAGGACAGAGATGTAGGGGTGGATTTGGTAAAATCACTACAAAATACCAAGTACTCAATCAATGAAAAACTAGAGAACAGTTTTATCAATCTTTTTGGTCAAAAGCGCAAAGTGTCATCAGAAGCTCTAGCTGATGCACAGGCCATAAACAAGGATGTAGAACAGGATGACAAAACAGAGGCCTTGGATAATTATGAGCCTGGCGTCGGTATAATTGGTGAATATAATCACAAAATGGATTTGGATGGTTCAGAATCATCTGATCAGGATGATGGTGATGCCAATGGAGATAATGAAGGCAGTAGTTCTGATGATGAAGATGATGATGCAACAGATAGTAAAGCTATGAACAGAGACCACTTAAAAGAGCGTATTGAGTTTCATGATGGAAGACGAAGGAGAAGAGCAATATTTGGAAATGATGTTGATCAAAGTGATCTGATGGATTCAGAAGAAGATGAGGATGGTGCTTCCAGTGATGACATGGCATCTGATTCAGAGGCTTCAAAAGAAGATGACAACGAGAATGATGACACAAATGACATGGGTAATGTTTCCAAGTGGAAAGAGTCTTTGGCAGAAAGAACTCTCTCACGAAAAACTCCTAGTTTGATGCAACTTGTGTATGGGGAATCTACTATTAGTCCAACCTCTATAAACAAAGAGAATGATAATAGTGAGGGTGAAGAAAGTGAAGATGACTTTTTTAAGCCCATAGAAGAAGTGAAAAAGCAAAACATGAGAGATGGATTGAATGATGGAATAGTAAACACTGAGGATTGTTCCAAGTGTACACAATTTGTGGATCAGAGATGGGATGAGAAAGATAACGAGGAGATTCGCAATCGATTTGTATCTGGCAATTTGGCAAAAGCTGCACTCAGAAATGCACTACCAAAAGCCAATGCTGAAGTGGAAAATGACGATGTCTATGGTGACTTTGAAGATATGGAAACTGGAGAAAAATTTGAGAATTATGAGACGGATGATGCTTTTGCAGAGACAACCCACAAGGTAGATGATTTGGAAGCTGAGGAGCGGCGCCTTAAGAAACTTGCTCTTCGTGCAAAGTTTGATTCTCAATTTGATGATGACTTTGGGTCACCAGAGGAAGATACCAGCAATGAAAATGAGAGCATGTTCCATCGTGGTCAAGCTAATGAAAGTAGCTATTTTGACAAGTTGAAGGAGGAGATTGAACTCCAGAAACAAATGAATATAGCTGAACTCAACGATCTTGATGAGGCTACTCGATTAGAGATAGCAGGCTTCCGAACAGGGACATACCTAAGATTGGAGGTTCATGATATTCCTTGTGAGATGGTTGAATATTTTGATCCCTACCATCCAATATTGGTTGGAGGGGTTGGTATAGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGGCACAGGTGGCACAAGAAAGTTCTGAAGACCAGAGACCCAATTATTGTATCTGTGGGATGGAGGCGTTACCAGACAACCCCTGTTTATGCTATCGAGGATAGCAATGGAAGGCATCGTATGCTAAAATACACTCCAGAACACATGCATTGCCTTGCTATGTTTTGGGGTCCTCTTGCTCCTCCCAACACTGGGATTGTTGCTGTTCAGAATTTATCAAACAACCAGGCAACATTTAGGATTACTGCAACTGCTGTTGTACTTGAGTTTAATCATGCAGCAAGGATAGTGAAGAAAATCAAATTGGTTGGCCACCCATGCAAGATATTCAAGAAGACAGCACTTATCAAGGATATGTTTACCTCGGATCTTGAAGTAGCTCGGTTTGAAGGTGCAGCTATTCGAACTGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGAAATAGGTAACCAACCAAAAAGGAAGGGTGGGCAAACCAAGGAAGGAATTGCTAGGTGCACTTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTTCGTGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCATTGACAACAGCATTGCAGCGTCGTGATCTGACCTGGAAAGGAATGAGAACTGTTGCAGAATTGAGAAGAGAACATGATCTTCCTATACCTGTAAACAAAGATTCACTTTACAAGAAAATTGAAAGAAAACCTAGAAAGTTCAACCCATTGGTGATTCCCAAGTCTCTACAAGCAAGTCTACCATTTGCATCAAAACCCAAGGATATACCCAAGAGAAAAAAGCCATTACTTGAAGAGAGAAGGACAAGGGGTGTTGTCATGGAGCCTCGAGAGCGCAAAGTTCATGCTCTCGTTCAACACCTCCAGTTAATAAACAATGCAAAGATGAAAAAGCGAAAGCTTAAGGAAGAGAATAAGAGAAAAGTACTTGAAGCAGACAGAGCAAAAGACGAGCAGTTGTCAAAAAAGCGGCGGAGAGAGGAAAGGCGAGACAAGTACCGAGCACAAGACAAGCTGAATAAGAAAATTCGGAGAGCAGATGTTTGA 3627 0.4144 MAVNDADQSNKAHRTRQSGSKSVKKKHKKIKHDAGENQKNQNPKAFAFSSSNKAKRLQSRAVEKEQRRLHAPIIDRSYGEPAPYVVVVHGPPQVGKSLLIKCLIKHYTKHNLPDVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFNDPKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRAGHPYVLVDRFEDITPPEKVHANNKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYSLASITDLPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHFVQFSKVDNEDSAMTSKGKDRDVGVDLVKSLQNTKYSINEKLENSFINLFGQKRKVSSEALADAQAINKDVEQDDKTEALDNYEPGVGIIGEYNHKMDLDGSESSDQDDGDANGDNEGSSSDDEDDDATDSKAMNRDHLKERIEFHDGRRRRRAIFGNDVDQSDLMDSEEDEDGASSDDMASDSEASKEDDNENDDTNDMGNVSKWKESLAERTLSRKTPSLMQLVYGESTISPTSINKENDNSEGEESEDDFFKPIEEVKKQNMRDGLNDGIVNTEDCSKCTQFVDQRWDEKDNEEIRNRFVSGNLAKAALRNALPKANAEVENDDVYGDFEDMETGEKFENYETDDAFAETTHKVDDLEAEERRLKKLALRAKFDSQFDDDFGSPEEDTSNENESMFHRGQANESSYFDKLKEEIELQKQMNIAELNDLDEATRLEIAGFRTGTYLRLEVHDIPCEMVEYFDPYHPILVGGVGIGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGHPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQRRDLTWKGMRTVAELRREHDLPIPVNKDSLYKKIERKPRKFNPLVIPKSLQASLPFASKPKDIPKRKKPLLEERRTRGVVMEPRERKVHALVQHLQLINNAKMKKRKLKEENKRKVLEADRAKDEQLSKKRRREERRDKYRAQDKLNKKIRRADV* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0240 1208 Pfam AARP2CN (NUC121) domain 232 317 IPR012948 GO:0005634|GO:0042254
Apr5g0240 1208 MobiDBLite consensus disorder prediction 523 557 - -
Apr5g0240 1208 MobiDBLite consensus disorder prediction 17 32 - -
Apr5g0240 1208 CDD BMS1 45 274 IPR037875 GO:0005525
Apr5g0240 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 220 IPR027417 -
Apr5g0240 1208 SMART DUF663_2 716 1039 IPR007034 -
Apr5g0240 1208 Coils Coil 1144 1178 - -
Apr5g0240 1208 MobiDBLite consensus disorder prediction 1156 1208 - -
Apr5g0240 1208 MobiDBLite consensus disorder prediction 456 501 - -
Apr5g0240 1208 MobiDBLite consensus disorder prediction 575 600 - -
Apr5g0240 1208 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 82 246 IPR030387 -
Apr5g0240 1208 PANTHER RIBOSOME BIOGENESIS PROTEIN 500 1199 IPR039761 GO:0042254
Apr5g0240 1208 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 496 IPR039761 GO:0042254
Apr5g0240 1208 Gene3D - 85 246 IPR027417 -
Apr5g0240 1208 PANTHER BNAC08G44910D PROTEIN 1 496 - -
Apr5g0240 1208 PANTHER BNAC08G44910D PROTEIN 500 1199 - -
Apr5g0240 1208 SMART aarp2cn2 232 318 IPR012948 GO:0005634|GO:0042254
Apr5g0240 1208 Coils Coil 710 730 - -
Apr5g0240 1208 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 719 1040 IPR007034 -
Apr5g0240 1208 MobiDBLite consensus disorder prediction 1 66 - -
Apr5g0240 1208 MobiDBLite consensus disorder prediction 39 56 - -
Apr5g0240 1208 MobiDBLite consensus disorder prediction 464 488 - -
Apr5g0240 1208 MobiDBLite consensus disorder prediction 516 614 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0240 K14569 - gmx:100810906 1983.76